KEGG   Apteryx mantelli mantelli (North Island brown kiwi): 106487434
Entry
106487434         CDS       T04298                                 
Symbol
UTP4, CIRH1A
Name
(RefSeq) UTP4, small subunit processome component
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
aam  Apteryx mantelli mantelli (North Island brown kiwi)
Pathway
aam03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:aam00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    106487434 (UTP4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:aam03009]
    106487434 (UTP4)
Ribosome biogenesis [BR:aam03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    106487434 (UTP4)
SSDB
Motif
Pfam: WD40 Chitin_synth_2 Glyco_tranf_2_3 Glyco_trans_2_3 ANAPC4_WD40 HEAT DUF1294
Other DBs
NCBI-GeneID: 106487434
NCBI-ProteinID: XP_013801641
UniProt: A0A8B7IS50
Position
Un
AA seq 1148 aa
MVCKHGDALIHAFLRGSRDPDSTLRASSLSNLGELCQRLGFQLGSVVQEAVVAVAAAAPA
LTSSPPQILNKYDSWISFLSSVRYWMAFNVERACQSYFGCVQCISGPLGMYRNALLQHFL
EDWYHQTFLGSKCSFGDDRHLTNRVLSLGYQTKYTAHSKCLTETPTRYLRWLNQQTRWSK
SYFREWLYNALWFHKHHLWMTYESVVTGFFPFFLIATVIQLFYRGRIWNILLFLLTVQLV
GIIKATYACFLRGNAEMIFMSLYALLYMSSLLPAKMFAIATINKSGWGTSGRRTIVVNFV
GLLPVSVWVAVLLGGLAYTAYSQDLFSETEVAFLVSGAILYACYWMPGSLSTALRVVGTS
LFALAVLGGILAAYVTGYQFIHTEKHYLSFGLYGLLSLPFSAGRVLCLSWHPSETHIAAG
SVDLLRVLDVGSGRTVQRIMVNYHVQKSKKRECVVWSVAFLSSGTVVSSDSFGRVQFWDW
ERGTLLESHTVSTSAVLSLAVSEKEDSIVVGTSAGATYQFQLLPVKMGSQDKHWVRTKPF
QHHTHDVRAVAHSPTALISGGLDAQLVIRPLMEKMQKKGYEAALRKFTFPHRRLVSCARK
ARLLLFQFSQHLELWKLGSTNESGKDGEVLPVCRAPEHLVQLKSKGPEHIYCSCVSPCGS
WIAYSTASRFHLYRAQYEGDSVSIKKVANVPKLLLPAYQLQCSADSGSLFVASDQGSVHV
LQLLEPGGCKHLHTLRPPSGTLEAVYLLASSADGNWLAAASGDWEIHLYSLKRFKHHCTV
PTYSCAVTALAIHPVTNNLVIAYSDQQLFEFSIPEKQYTAWSRTVQNSGLHKAWLERDSP
ITHIAFNPKNPSHILLHDVYMFCVLDKSLPLPDDSASLMNQSALKQLPETARKRQLHAFK
ICKKFQPLLFADLLDENCLVMVERPIMDIKTQLPPPIQQKKFASYSGRINSAPAEGQPGA
ALLSHEALLQSLGPADAXELPSLPSRPQRCQSGAAGPGSLSCPICPLLPLQLFEFSIPEK
QYTAWSRTVQNSGLHKAWLERDSPITHIAFNPKNPSHILLHDVYMFCVLDKSLPLPDDSA
SLMNQSALKQLPETARKRQLHAFKICKKFQPLLFADLLDENCLVMVERPIMDIKTQLPPP
IQQKKFGT
NT seq 3447 nt   +upstreamnt  +downstreamnt
atggtctgcaagcacggagacgccctgatccacgccttcctacggggctcgcgggacccg
gacagcacgctgcgcgccagcagcctctccaacctgggggagctgtgccagcggctcggc
ttccagctgggctctgtggtccaggaggcggtggtggcggtggcggcagcggcgccggct
ctcacgtcctctcccccgcagatcctgaacaagtacgactcgtggatctccttcctgagc
agcgtgcgctactggatggccttcaacgtggagcgcgcctgccagtcctacttcggctgc
gtgcagtgcatcagcggccccctgggcatgtaccgcaacgccctcctgcagcacttcctc
gaggactggtaccaccagaccttcctgggcagcaagtgcagctttggggacgaccggcac
ctgaccaaccgcgtcctcagcctgggctaccagaccaagtacacggcccactccaagtgc
ctgacggagacgcccacccgctacctgcgctggctcaaccagcagacccgctggagcaag
tcctacttccgcgagtggctctacaacgccctgtggttccacaagcaccacctctggatg
acctacgagtccgtggtgaccggcttcttccccttcttcctcatcgccaccgtgatccag
ctcttctaccgcgggcgcatctggaacatcctcctcttcctcctgacggtgcagctggtg
ggcatcatcaaggccacatacgcctgcttcctccggggcaacgccgagatgatcttcatg
tccctctacgccctgctctacatgtccagcctgctgcccgccaagatgttcgccatcgcc
accatcaacaagtcgggctggggcacgtcggggcgccggaccatcgtggtcaactttgtg
gggctgctgccggtgtcggtgtgggtggccgtgctgctgggcgggctggcctacaccgcc
tacagccaggacctcttcagcgagaccgaggtggccttcctcgtctcgggcgccatcctc
tacgcctgctactggatgccagggagcctctccacggcgctgcgcgtggtggggaccagc
ctcttcgccctggccgtgctggggggcatcctggccgcctacgtcaccggctaccagttc
atccacacggagaagcactacctctccttcgggctgtacggcctgctctctctgcccttc
tctgcaggccgcgtcctgtgcctgtcctggcacccgtcagagactcacatcgctgccggc
tctgtcgacctcctccgcgtgcttgacgtcggttcgggccgcaccgtccagcggatcatg
gtgaattaccacgtgcagaagtccaagaagcgcgaatgcgtcgtgtggagcgtcgccttc
ctgtcgagcggcactgtcgtgagctcggactcgtttgggagggtgcagttctgggactgg
gagagagggaccctgctggagtcgcacaccgtcagcacctcggccgtcctgtccctggcc
gtgtcggagaaagaagacagcatcgttgtgggcacctcagcaggggccacgtaccagttc
cagctgctgccagtgaagatgggcagccaggacaagcactgggtgcggacgaagcccttc
cagcatcacacccacgacgtgcgagccgtggcgcacagcccgacggctctcatctccgga
ggcctggatgcccagctggtgatccgtccgctcatggagaagatgcagaaaaagggttac
gaggcggcgctccggaaattcaccttcccccaccgacgcctcgtctcctgtgccaggaaa
gcccggctccttctcttccagttctcacagcacctagagctctggaaacttggctctacc
aatgaaagcggaaaggacggcgaggtccttcccgtgtgccgcgcgcccgagcacctcgtg
cagctcaagagcaagggaccggagcacatctactgcagctgcgtttccccctgcggcagc
tggatcgcctactccacagcctcccgcttccacctctaccgagcacagtatgagggtgac
agcgtcagcatcaagaaggtcgccaacgtacccaagctgctgctcccggcgtaccagctc
cagtgctctgctgactccggtagcctctttgtcgcctccgatcaaggctccgtccacgtg
ctccagctcctggaaccagggggctgcaaacacttgcacacgcttcggccgccatcaggg
accttggaggccgtctacctgctggcgtcgagcgcggatgggaactggctggctgcagcc
agcggggactgggaaatccacctctacagcttgaaacgcttcaagcatcactgcacggtg
cccacgtacagctgcgcggtgactgccctcgccatccaccccgtgaccaacaaccttgtt
atcgcctactcggaccagcagctgttcgagttcagcatccccgagaagcagtacacggcc
tggagccgcacggtgcagaacagcgggctgcacaaggcctggctggagagggactcgccc
atcacccacatcgccttcaaccccaagaacccctcgcacatcctgcttcacgacgtctac
atgttctgcgtcctcgacaagtccctgcccctgcctgacgacagtgcctctctgatgaat
cagagcgccctgaagcagctgccggagacggccaggaagagacagctccacgctttcaag
atctgcaagaagttccagcccctgctctttgcggatctgctggacgagaactgccttgtg
atggtggagcggcccatcatggacatcaagacgcagctgccaccacccatccaacagaag
aaatttgcctcttattccggccggataaactctgctccagccgaggggcagcctggggct
gcgttgctttctcacgaagccctgctgcagtccctcgggcctgccgacgctngggagctc
ccttccctcccgtcacgtccccagcggtgtcagagcggggctgcggggccggggtcgctg
agctgccccatctgccctctcctgcctctgcagctgttcgagttcagcatccccgagaag
cagtacacggcctggagccgcacggtgcagaacagcgggctgcacaaggcctggctggag
agggactcgcccatcacccacatcgccttcaaccccaagaacccctcgcacatcctgctt
cacgacgtctacatgttctgcgtcctcgacaagtccctgcccctgcctgacgacagtgcc
tctctgatgaatcagagcgccctgaagcagctgccggagacagccaggaagagacagctc
cacgctttcaagatctgcaagaagttccagcccctgctctttgcggatctgctggacgag
aactgccttgtgatggtggagcggcccatcatggacatcaagacgcagctgccaccaccc
atccaacagaagaaatttggcacctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (47)   

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