KEGG   Apteryx mantelli mantelli (North Island brown kiwi): 106488831
Entry
106488831         CDS       T04298                                 
Symbol
RTCB
Name
(RefSeq) RNA 2',3'-cyclic phosphate and 5'-OH ligase
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
aam  Apteryx mantelli mantelli (North Island brown kiwi)
Brite
KEGG Orthology (KO) [BR:aam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:aam03016]
    106488831 (RTCB)
Enzymes [BR:aam01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     106488831 (RTCB)
Transfer RNA biogenesis [BR:aam03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    106488831 (RTCB)
 Prokaryotic type
   tRNA splicing ligases
    106488831 (RTCB)
SSDB
Motif
Pfam: RtcB Cu-oxidase_4
Other DBs
NCBI-GeneID: 106488831
NCBI-ProteinID: XP_013803347
UniProt: A0A8B7IWQ9
Position
Un
AA seq 440 aa
MKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPEAVVSPGGVGFDINCGVR
LLRTNLDESDVQPVKEQLAQAMFDHIPVGVGSKGVIPMNAKDLEEALEMGVDWSLREGYA
WAEDKEHCEEYGRMLQADPNKVSSRAKKRGLPQLGTLGAGNHYAEIQVVDDIYNEYAARK
MGIDHKGQVCVMIHSGSRGLGHQVATDALVAMEKAMKRDKIIVNDRQLACARIASAEGQD
YLKGMAAAGNYAWVNRSSMTFLTRQAFAKVFNTTPDDLDMHVIYDVSHNIAKVEQHVVDG
KERTLLVHRKGSTRAFPPHHPLIAVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMTETFGT
TCHGAGRALSRAKSRRNLDFQDVLDKLADMGIAIRVASPKLVMEEAPESYKNVTDVVNTC
HAAGISKKAIKLRPIAVIKG
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgaaacagattgggaatgtggctgcattacctggcattgttcacagatcaataggcctt
ccagatgtccattcaggctatgggtttgccattggcaacatggctgccttcgatatgaat
gatcctgaagcagtagtgtcaccaggtggtgtcgggtttgacatcaactgtggtgtccgc
ttactacgtacaaacttggacgaaagtgatgtacagcctgtgaaggagcagctcgctcag
gctatgtttgaccacattcctgttggtgtgggctccaagggtgtcatccccatgaatgcc
aaggatttggaagaggctctagaaatgggtgtggactggtctctccgggaaggctatgcc
tgggcagaggacaaggagcactgcgaggaatatggaaggatgctgcaggctgatcccaac
aaggtttcctcaagagcaaagaagaggggcctccctcagctggggaccttgggagcagga
aaccattatgccgagatccaggttgtggatgacatttacaacgaatatgctgccaggaaa
atgggcattgaccacaaggggcaggtgtgcgtaatgatccacagtggcagcagaggtttg
ggccaccaagttgccacagatgcattggtggctatggaaaaagctatgaaacgggacaaa
atcatagtgaatgatcgccagctggcgtgtgccagaattgcctctgcagaaggacaggat
tacctgaagggaatggcagctgctggaaactatgcatgggtcaaccgctcttctatgact
ttcttaacaagacaggcctttgccaaagtcttcaacacaaccccagatgaccttgatatg
catgttatctatgatgtatctcacaacattgccaaagtggagcaacatgtagtggatgga
aaagagcgaactctgctggtgcacaggaagggatcaaccagggccttccctcctcaccat
ccccttatcgctgttgattatcaactgactggacagcctgttctgattggcgggactatg
ggcacctgtagctacgttcttactggcacagagcaaggcatgactgagaccttcggaact
acttgtcatggagctggtcgtgctctgtctcgagccaaatctcgacgtaacttggacttc
caggatgtattggacaaactggctgacatgggcattgccatccgtgttgcttctcccaaa
ctggttatggaagaagcaccagagtcttataagaatgtgacagatgtggttaacacctgc
catgcagctggcatcagcaagaaagccattaaattgagacctattgctgttattaaaggc
tag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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