KEGG   Apteryx mantelli mantelli (North Island brown kiwi): 106488839
Entry
106488839         CDS       T04298                                 
Symbol
PDZRN4
Name
(RefSeq) PDZ domain containing ring finger 4
  KO
K15682  ligand of Numb protein X 3/4 [EC:2.3.2.27]
Organism
aam  Apteryx mantelli mantelli (North Island brown kiwi)
Brite
KEGG Orthology (KO) [BR:aam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aam04121]
    106488839 (PDZRN4)
Enzymes [BR:aam01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106488839 (PDZRN4)
Ubiquitin system [BR:aam04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Ligand of Numb proteins
    106488839 (PDZRN4)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 Tricorn_PDZ
Other DBs
NCBI-GeneID: 106488839
NCBI-ProteinID: XP_013803356
UniProt: A0A8B7IX29
Position
Un
AA seq 810 aa
MLHRENDTLGFNIIGGRPNQNNQEASSAEGIYVSKILENGPADKAEGLKIRDKIIEVNGK
DLSKATHEEAVEAFRSAKEPIVVQVLRRAPVNKAHGTSQDVQLVDASTQTDITFEHIMAL
AKLRPSTSPVPDICPFLLSDSCHSLHPVEHEFYEGNEYLSSLPADADRAEDFEYEEVELC
RISSQEKLGLTVCYRTDDEEDTGIYVSEVDPNSIAARDGRIREGDRILQINGQDVQNREE
AVALLSSDECKKIVLLVARPEMQLEEGWLDDERNEFLEELNLEMLEEQHNEAMQYTANEV
EQPKKHEEEDGTTDTATSSSNNHEKDSGVGPTDESLRNDESSEQENAPEEQNNATLQSKR
ELGQSQDTLRSVELQCNESFVSGEYIESDFTGNPDEECERFRQLLELKCKIRNHGEYDLY
YSSSTIECNRREQDGVEHELQLLNEELRNIELECQNIMQAHRLQKVRDQYGDIWALHDEG
FRNYNTSVDVQRGKLDDIMEHPEKSDKDSSSAYNTAESCRSTPLTVERSPDNSLQRMISI
TNRKNLRSTIVANQMSSGQSSGEATSSKTKVTEQNSAAEDTVLVSESGKFTDQEKQSTEH
IPYLSPYHSSSYRYGNIPAHAKHYQSYMQLIQQKSAVEYAQSQLSLVSMCKDSQKCAEPK
MEWKVKIRSDGTRYITKRPVRDRILKERALKIKEERSGMTTDDDTMSEMKMGRYWSKEER
KQHLVRAKEQRRRREFMMRSRLECLKESPQSGSEGKKEINIIELSHKKMMKRRNKKILDN
WMTIQELMTHGAKSPDGTRVHNAFLSVTTV
NT seq 2433 nt   +upstreamnt  +downstreamnt
atgctacacagagaaaatgatactttgggattcaatattataggaggacgacccaatcag
aacaatcaggaggcatcttctgctgagggaatttatgtgtcaaaaattttggaaaatgga
cctgcagacaaagcagaaggcctgaaaattcgtgacaagattatcgaggtcaatgggaaa
gatctctccaaggccactcatgaagaggcagtggaagcttttcgtagtgctaaggagccc
attgtagttcaggttttacgacgagccccagtcaacaaagctcatggtacctctcaggat
gttcagcttgtggatgctagcactcagactgacatcacgttcgagcacattatggccctg
gcaaaactaaggccttccacatctccagtacctgatatctgcccttttctactttcagac
agctgccattctcttcacccagtggagcatgaattttatgaaggtaatgagtatctttcc
agcctgcctgctgatgcagatagagcagaggactttgagtatgaggaggtggagctgtgc
cgcattagcagccaagagaagctggggctgacggtctgttacagaacagatgatgaggaa
gacacagggatctatgtcagcgaggttgatccaaatagcattgctgccagagatggccgg
atccgggaaggagaccgcattttgcaaataaatggccaagatgtccagaatcgggaagag
gcagtggcattgctctccagcgatgaatgcaaaaaaattgtgttgctggttgcaagacca
gagatgcagctggaggaagggtggctggatgatgaaaggaatgaattcttagaggagtta
aacttagaaatgttggaagagcagcataatgaagcaatgcagtacacagccaatgaggtg
gagcagccaaagaagcatgaagaagaggatggcactacagacactgcaacctcatcgtcc
aacaaccatgagaaggacagtggggtgggacctacagatgaaagtctgcgtaatgatgag
agctcagagcaagaaaatgcacctgaggagcagaacaatgctaccctacagagcaaacgg
gagctgggccagagccaagacacattaagaagtgttgaactacagtgcaacgaaagcttt
gtatctggagaatacattgaatctgatttcacaggaaacccagatgaggaatgtgaaagg
tttcggcagctgttggaactgaagtgcaagattcgaaaccacggggagtatgatctgtat
tactcaagcagcacaatagagtgcaacagaagggagcaagatggggtggagcatgagcta
cagctactcaatgaggaactgaggaatattgaactcgaatgtcagaatattatgcaagct
caccggcttcaaaaggtgagggatcaatatggagacatttgggctctacatgatgaaggg
ttcaggaactataacaccagtgtcgatgtacaaagaggcaaactggatgacatcatggag
caccccgagaagtctgacaaggacagctccagtgcatacaacacggctgaaagctgcagg
agcactccgctgactgtagagcgatcccccgataactccctccagaggatgataagcatc
accaacaggaaaaacctgaggagcaccatcgtggctaatcagatgtcctcaggacaaagc
agtggggaggcaacctcatccaaaaccaaagtcactgagcaaaacagtgctgccgaggat
acagtgctggtttcagaaagtggaaaattcacagaccaggaaaagcagagcactgagcac
attccctacctgtctccatatcacagctcttcctacaggtatgggaatataccagctcat
gcaaaacattatcaaagctatatgcaactgatccagcagaagtctgctgtggagtatgcc
caaagccagctcagcctggtgagcatgtgcaaagactcacagaagtgtgcggagcccaag
atggaatggaaagtgaaaataaggagtgatgggacaaggtatatcacaaagagaccagtt
cgagacagaatcctgaaggaacgtgccttaaaaattaaagaggagcgcagcgggatgacg
acggatgatgatacaatgagtgaaatgaagatgggtcgttactggagcaaagaagagcgg
aagcagcatttggtgcgagctaaggagcagaggaggcggcgggagttcatgatgcggagc
aggctggagtgtcttaaggaaagtccacagagtggcagcgagggcaaaaaggaaattaac
attattgaactgagtcacaaaaagatgatgaaaaggagaaacaagaaaatcttggacaac
tggatgacaatccaagaactgatgacacatggtgctaaatctccagatggcacaagagtg
cacaatgcctttctatcagttactactgtatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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