KEGG   Aggregatibacter aphrophilus NJ8700: NT05HA_1849
Entry
NT05HA_1849       CDS       T00929                                 
Name
(GenBank) RNA polymerase-associated protein RapA (ATP-dependenthelicase hepA)
  KO
K03580  ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
aap  Aggregatibacter aphrophilus NJ8700
Brite
KEGG Orthology (KO) [BR:aap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aap03021]
    NT05HA_1849
Transcription machinery [BR:aap03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     NT05HA_1849
SSDB
Motif
Pfam: RapA_C Tudor_1_RapA Tudor_RapA Helicase_C SNF2-rel_dom ResIII DEAD AAA_34
Other DBs
NCBI-ProteinID: ACS98176
Position
1834225..1837083
AA seq 952 aa
MAFAIGQRWISETENNLGLGVISAVDFRQVTIDFPAAQEQRIYAVQSAPLSRVQFRLGDQ
VQHIEGWHGEVTNVAENNGLLFYLVQPQAGQDRVVSEMELAHRISFSRPQERLFFAQIDR
NEHFVLRYHALQYQKAQFQSPLRGLRGIHAGLIPHQLHIAKEAGQRVTPRVLLADEVGLG
KTIEAGMILQQQLFAEKVRRVLIIVPETLQHQWLVEMLRRFNFHFSLFDEERCADFAATE
DREEVNPFTTESLIICALDWLVQHPQRVQQLLAAEFDMLIADEVHHLLYDEINPSLEYQL
VQQLTQQIPAVLLLTATPEQLGQQSHFARLNLLDPHRFHDYRAFLEEQQHYQPIAEAAQS
LLANKPLSAVEKNKISALLGEDINFNGTNKETLIKQLIDRHGTGRLLFRNTRQSVQGFPK
RIYYPIALPQPKQYENAIKTLRAFDEHPVQCALYPEHFMRELNANTAWWEFDPRVQWLID
FLKQHRQEKVFVICRYAGTAIQLEQILREKEGIRSAVFHEKMSIVERDRAAAYFTQQENA
AQVLLSSNIGSEGRNFQFASRLVLFNLPENPDLLEQCIGRLDRIGQTKDIQIYLPYFTDG
AQATLADWYHLGLNAFNETCPMGALLFEQFGEALQKTLENPTALEAQKALIEHTQQERLR
LKQLLEQGRDLLLELNSNGGESAKQLAQEIAAQDGSPELVDFALNLFDVIGVEQEDLGEK
SIVITPTGTMLVPEFPGLKEEGVTVTFDRQLALAREELEFLTWDHPMIYHGIDLITSGDI
GKSAVALLPNKHLPAGTLLLELVYVVETQAPQGLQLTRFLPPTPIRLLLDSKGNDLAQQV
VFDHLQRKLKPMDRNMANKVAKMLRPNIETLITQGEKVMAQQSKEIIANAEQQARQHLDE
ELTRLIALRKVNKNIRQDEIDTLQTQRKQMLQCLQQATWRLDCLRVIVTNKE
NT seq 2859 nt   +upstreamnt  +downstreamnt
atggcgtttgcaatcggtcagcgttggatcagcgaaacggaaaataatttaggtttaggc
gtgattagcgccgtggattttcggcaggtgaccattgacttccccgccgcgcaagaacag
cgtatttatgcggtgcaaagtgcgccgttaagccgtgtgcaatttcgtcttggcgatcag
gttcaacatattgaaggttggcatggcgaagtgaccaacgttgcagaaaacaacggattg
ctattctatttggtgcaaccacaagctgggcaagatcgcgtggtcagcgaaatggagttg
gcccatcgaatttccttcagccgaccgcaagagcggttatttttcgcacagattgatcgt
aacgagcattttgtcttgcgttatcacgcgttgcaatatcaaaaagctcaatttcaatcg
ccgttgcgtggcctacgcggcattcacgcgggactcattcctcatcagctacatattgca
aaagaagcggggcaacgcgtgacaccgcgcgtactgttggcggatgaagtgggcttgggc
aaaaccattgaagccggcatgattttgcaacaacagcttttcgccgagaaagtgcgccga
gtgctgattatcgtgccagaaacgctacaacaccaatggttggtggaaatgttgcgtcgt
ttcaattttcatttttcactgtttgacgaagaacgttgcgccgattttgccgcgacggaa
gatcgcgaggaagtgaatccgtttactaccgaatcgctgattatttgcgccttagactgg
ctagtgcagcatccgcaacgggtgcaacaactattggctgccgaatttgatatgttgatt
gccgatgaagtgcatcatttgttgtatgacgaaatcaatccgagtttggaatatcaactg
gtgcaacaactcacgcaacaaattcccgccgtattattgctcaccgcaacgccggaacag
cttgggcaacaaagccattttgcccgtctgaatttactcgacccacaccgcttccacgat
taccgcgcttttttggaagaacaacagcattaccaacctattgccgaggcagcacaatcc
ttattggcgaataagcccttaagtgcggtggaaaaaaataaaatttctgccttgttgggt
gaagacatcaatttcaatgggacgaataaagaaacgctcattaaacaacttatcgaccgc
cacggcacggggcgtttgctatttcgcaatacccgccaaagcgtacaaggttttccgaaa
agaatttattatccgatcgccctaccacagccgaaacaatacgaaaatgcgattaaaacc
ctcagggcatttgatgaacatcccgtgcaatgcgccctttaccccgaacatttcatgcgc
gaactcaatgccaatacggcatggtgggaatttgacccgcgtgtgcaatggctgattgat
tttttaaaacaacatcggcaagaaaaagtgtttgtgatttgtcgttatgccggaacagca
attcagttggagcaaattctgcgtgaaaaagaaggcattcgtagcgccgtattccatgaa
aaaatgtctattgtggaacgcgatcgtgcggcggcttacttcacccaacaagaaaacgct
gctcaggtgttgctcagttccaatatcggttccgaagggcgaaacttccaatttgccagc
cgtttagtgttattcaatttgccggaaaaccctgacttgttggaacagtgtatcggccgc
ttggatcgtattgggcaaaccaaagatattcagatttatttgccgtattttaccgacggc
gcacaagcgacattggccgattggtatcatttggggttaaatgccttcaacgaaacctgt
ccgatgggcgcgttgttattcgagcagttcggtgaagcattacaaaaaacattggaaaat
ccgaccgcacttgaagctcaaaaggcattaatcgagcacactcagcaggaacgattacgt
ttaaaacagctattggaacaaggtcgagatctgttgctggaactgaattcgaacggtggt
gagtctgcgaaacagctggcacaagaaattgccgcacaagacggtagcccggaattggtc
gattttgccttaaatctgtttgatgtcattggcgtggagcaagaagatttaggggaaaaa
tccattgtgattaccccaacaggcacaatgctggtaccggaattcccgggcttaaaagaa
gaaggcgtcaccgtcacgttcgaccgtcaattggcgttagcgcgcgaggagttggaattt
ctcacgtgggaccacccgatgatttaccacggcattgatttaatcacctccggcgacata
ggcaaaagcgccgtcgcgttgttaccgaataaacatctgccggccggtacattgttatta
gaactggtgtatgtggtggaaacacaagcaccgcaagggttacaattaacccgcttcctg
ccaccaacgccgatacgtttattattagatagcaaaggcaatgacttagcgcaacaggtg
gtgtttgatcatttacaacgtaagctcaaaccgatggaccgcaacatggcgaataaagtg
gcgaaaatgttgcgaccgaatatcgaaacgctcattacgcaaggcgaaaaggtgatggca
cagcaaagcaaggagattatcgccaatgccgaacaacaggcacggcaacaccttgacgaa
gaattaactcgcctcatcgccttacgaaaagtgaataaaaatatccgtcaggatgaaatt
gacaccttgcagacgcaacgaaaacaaatgctacaatgcttacagcaagccacatggcgc
ttggattgcctacgcgtgattgtgaccaataaggaataa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (32)   

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