KEGG   Alcaligenes aquatilis: D3M96_13735
Entry
D3M96_13735       CDS       T05678                                 
Symbol
rpoE
Name
(GenBank) RNA polymerase sigma factor RpoE
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
aaqu  Alcaligenes aquatilis
Brite
KEGG Orthology (KO) [BR:aaqu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aaqu03021]
    D3M96_13735 (rpoE)
Transcription machinery [BR:aaqu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     D3M96_13735 (rpoE)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_16 Phage_antitermQ HTH_20 TnsD
Other DBs
NCBI-ProteinID: AYN21495
UniProt: A0A3G2HWP4
Position
complement(3016041..3016643)
AA seq 200 aa
MSERDTDAELVARVQRGDKRAFDLLVLKYQRKIMRLLSRMVRDPSEVEDVAQETFIKAYR
ALPQFRGESAFYTWLYRIAINTARNWQASAARRPNTLQNVETEEGETFDRIDNLSDISTP
ESMMVSRQIAETVNTAIQALPEELRTAIVLREIEGMSYEDIAQTMDCPIGTVRSRIFRAR
DAIAAQLRPILDGEDSERRW
NT seq 603 nt   +upstreamnt  +downstreamnt
atgagtgaacgcgataccgatgccgaactagttgcacgtgttcagcgtggggataagcga
gcctttgacctgctggtactgaagtaccagcgcaaaatcatgcgtctgctcagtcgtatg
gtacgtgacccgtctgaagttgaagacgtggctcaggaaaccttcatcaaagcgtaccga
gctctacctcagtttcggggtgagagtgctttttacacttggctgtaccgtattgcgatc
aacacggcccgtaattggcaggcctcggccgcacgacgtcccaacactttgcagaacgtc
gaaaccgaagaaggtgaaacttttgaccgaatcgacaacctaagcgatataagcacgcca
gaatccatgatggtcagccgccagattgctgaaacagtgaatacagcaatccaggcgctg
cccgaagagttgcggacagctatcgtgctacgtgaaatagaaggtatgagctacgaagat
attgctcagaccatggactgccctataggaactgtacgctcacgcatctttcgagcccgc
gacgccattgctgcgcagttgcgtcccatacttgatggtgaagatagtgaacgacggtgg
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (15)   

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