KEGG   Acetohalobium arabaticum: Acear_0189
Entry
Acear_0189        CDS       T01290                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
aar  Acetohalobium arabaticum
Pathway
aar03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:aar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Acear_0189
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aar03021]
    Acear_0189
   03400 DNA repair and recombination proteins [BR:aar03400]
    Acear_0189
Enzymes [BR:aar01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Acear_0189
Transcription machinery [BR:aar03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Acear_0189
DNA repair and recombination proteins [BR:aar03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Acear_0189
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 DUF4559
Other DBs
NCBI-ProteinID: ADL11740
UniProt: D9QTH6
Position
193723..194667
AA seq 314 aa
MIEFEKPAIERIESTDTYGKFAITPLERGYGITLGNSLRRIMLSSLPGTAPTSVKIEGVE
HEFSTISGVVEDVTDIVLNLKELVLRMESEEPEILRLNASGEGEVTADEFTVSGNIEILN
PDQHIATLSDDGQLDMEVTVENGRGYVSAEENKDDEEHVIGVIPMDSSFSPIKRVNFDVE
DVWVGNRTDLDKLVLEINTDGSLTPEEAISLAAKVLDEHLDLLINLNEEITDVDLMVEKE
EEEKDKVLETTIEELDLSVRSSNCLKRAGIDNVEELTEQTEDDLMKVRNLGKKSLQEIKD
KLDELDLSLKKPEI
NT seq 945 nt   +upstreamnt  +downstreamnt
atgatagaatttgagaagcctgcgattgaaagaatagagtcaactgatacctatggtaaa
tttgcaattactccgttggagcggggctacggtatcacgctcggaaactctctacgcaga
attatgctgtcttcattaccagggacagctcctacatcagtaaagattgaaggggtagaa
catgaattttcaactatatcaggcgtagtagaagatgtaactgatattgtattaaaccta
aaagaactggttcttagaatggaatcagaagagccagaaattttacgtttgaatgcttct
ggagaaggagaggttactgctgatgaatttactgttagcgggaatatagaaatccttaat
cctgaccagcatatagctaccttaagtgatgatggacaattggatatggaagtaacagtt
gagaatggtagaggttatgtttctgctgaagagaataaagatgatgaagaacatgttatc
ggagtaattcctatggattcatctttttccccaattaagcgtgtcaactttgatgtagag
gatgtctgggtaggcaatagaactgatttggataaattggttttggaaattaatactgat
gggagcttaactcctgaagaagcaatcagtttagctgctaaagtgctggatgaacatcta
gatcttttaattaatctgaatgaagagattactgatgtggatttaatggtggaaaaagag
gaagaagagaaggataaggttctggaaacaactattgaagaactggatctgtccgtacgt
tcatctaactgtcttaagcgggccgggattgataacgtagaagagttaactgaacagact
gaagatgacttaatgaaggttagaaacttaggcaagaaatctctacaggagatcaaggat
aaattagacgaattggatctttccttaaaaaagcctgagatataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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