KEGG   Acetohalobium arabaticum: Acear_0320
Entry
Acear_0320        CDS       T01290                                 
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
  KO
K03092  RNA polymerase sigma-54 factor
Organism
aar  Acetohalobium arabaticum
Pathway
aar02020  Two-component system
aar02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:aar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Acear_0320
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Acear_0320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aar03021]
    Acear_0320
Transcription machinery [BR:aar03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Acear_0320
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_12 HTH_Crp_2 HTH_Tnp_Tc3_2 HTH_32 Arg_repressor HTH_IclR HTH_Tnp_ISL3 HTH_21
Other DBs
NCBI-ProteinID: ADL11869
UniProt: D9QU76
Position
345619..347010
AA seq 463 aa
MKLTPEISLEQKQELIMTPKLQQAIELLQLSKLELNQRLEQEMLENPVLERAEEEGEEVE
EDLTDEFEDVDWEDYFVDSSSNYKVNNYDQDEDEYNYENFVSASLTLEEHLLHQLHLLQL
SSQQIKIGEYIIGSLDNNGFLDTSITQLSKELKVEESGVEEVLAKIQQFDPTGVAAKDLQ
DSLLIQIDNLVLEAEKKELMNKIVTDHFELVSKNQLRKLSKELSIGLEKIQQLVDLIKML
HPNPANLYTKEVDTKYIEPDLIVEKINGRYVVTMEQDSTPRLRINAYYQKLLKKFKSDAK
AKEYLQEKINSALWLIKSIEQRRMTIYRIAEVIVDLQQEFLERGLKYLRPMTMQDVAEEI
DMHESTVSRATTSKYIQTPRGLFELKFFFSPGLETKTGEVFSAISIKKMIKDILAKEDKK
KPLSDQKIADKLEERGVEVSRRTVSKYRNELEIPSSTQRRRYS
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgaaattaactcctgaaatatctttagagcagaagcaagagctgatcatgactcctaag
ctgcagcaggctattgaattattacagctatccaaactggaattgaaccagcgtttagaa
caggagatgttggagaatcctgttttagaaagggcagaggaagaaggtgaagaggtagaa
gaagatctgacagatgaatttgaagatgtagattgggaggattattttgtagactccagt
tcgaattataaagttaataattatgatcaagatgaagatgagtataactacgaaaatttt
gtttcagcttcgcttacgcttgaagaacatttactccatcaactacatttattacagcta
agctctcaacagataaagattggagaatatattatcggttcccttgataataatggcttt
ttagatacttctataactcaattaagtaaggaattaaaagtagaggagagtggggtagaa
gaggttttagctaagatccaacagtttgacccaaccggagtggcagctaaggacttacag
gattctcttttaattcagattgataatttggtattagaggctgagaagaaggaattaatg
aataaaattgtaactgatcactttgaattagtaagtaaaaatcagcttcggaaattatct
aaagagttgagtattggtcttgaaaagattcagcagctagttgatttaataaagatgctg
catccgaatccggctaatctatatactaaagaggtagatactaaatatattgaaccggat
ttaatagttgaaaagattaatggtagatatgtagtaactatggaacaggattctactcct
cggcttagaattaatgcttactatcaaaagttattaaagaagtttaaatcggatgctaag
gctaaagaatatcttcaggaaaagattaactctgctctctggttaattaaaagtattgag
cagcgaagaatgacaatttatcgcattgctgaagtaattgttgatcttcagcaggagttt
ttagaacgaggtctgaagtatctgcgtccgatgacaatgcaggatgtagctgaagagatt
gatatgcatgaatcaactgtcagccgggctactaccagcaaatatatacagactcctcgc
ggcttatttgaattgaaattcttcttttcaccaggacttgaaactaagactggagaggta
ttttcagcaatcagtattaagaaaatgatcaaggatatattagctaaagaggataaaaag
aagcctttgagtgatcaaaagatagctgataagctagaggagaggggagttgaagtatca
cgccggacagtttctaagtatagaaatgaattagaaattccctcttctactcagcggaga
agatatagttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (80)   
   KEGG ORTHOLOGY (1)   
   RefGene (77)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (97)   

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