KEGG   Amedibacterium intestinale JCM 30884: Aargi30884_03910
Entry
Aargi30884_03910  CDS       T06426                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
aarg  Amedibacterium intestinale JCM 30884
Pathway
aarg03030  DNA replication
aarg03430  Mismatch repair
aarg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aarg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Aargi30884_03910 (dnaE)
   03430 Mismatch repair
    Aargi30884_03910 (dnaE)
   03440 Homologous recombination
    Aargi30884_03910 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aarg03032]
    Aargi30884_03910 (dnaE)
   03400 DNA repair and recombination proteins [BR:aarg03400]
    Aargi30884_03910 (dnaE)
Enzymes [BR:aarg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Aargi30884_03910 (dnaE)
DNA replication proteins [BR:aarg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Aargi30884_03910 (dnaE)
DNA repair and recombination proteins [BR:aarg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Aargi30884_03910 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon HHH_3 DUF655
Other DBs
NCBI-ProteinID: BBK21488
UniProt: A0A6N4TEY4
Position
393887..396973
AA seq 1028 aa
MSVALHVRSSYTLLQSTLTIPQIVECAKKHGYKAVALTDKQVLHGAMQFYHACKEAAIKP
ILGMEVDVVEGENIFGFVLLAKNDDGYKDLMKLSTLLNTEQHVSLSLEELMLYTKHCVVI
TNGDQNKMETMLLKEDWEEMKLFLAQCNSYFSDFYVSIARNDSPLLKQKNVQLKRLCKSM
EIKTVALSRIYTADAQDDLIFKTLCAIKQGVSLEDKMLNYSPRRYFRSQEEMEQLYDSDD
LMMSNMISDMCNVTMSFPKAQLPKFKNRYGVSSDEFLKNLCHKGLEKRMGFKQIPQVYQK
RLSYELDIIIRMGFADYFLIVWDFIRFAKTKNIYIGPGRGSAAGSLVSYCLGITHADPIR
YHLLFERFLNPERVSMPDIDTDFPDDRREEVIQYVYELYGKHHVAHIITFNTLGAKQVLR
DVGKAMMVPIRQIDSLCRLVPNKLKVTLQDAYDDEPRFKQMINSSETLKKLFAISQRLEG
LPRHSSLHAAGIILSREQIEEVCPLIDVDEGICATQFTMEYMEELGLIKMDFLGLRNLTI
IDEIVSQLHKNGHAIDIMKIPLNDKKTFDLIQSVDTMGVFQLESEGMKSLIRKIKPRNFE
DIVTTIALFRPGPMENIPEYLKRREHPDTIDYIHPDFKDILENTYGIMIYQEQIMQIAQR
MAGFSLGKADNLRKAISKKKGDQLQSFRKEFVEGSIKKGYEKTLAEHVYELIMKFANYGF
NRSHSVAYGMIAYQMAYLKANAPQYFFRSLLNSVIGSEIKTSEYIFEAKKRKLTVLPPSV
NKSSSLYEIEQNCLRFPLQGIKGIGSAVSTQILKEREKRGEFKDFFDFTARMCGNKIGKK
TIELLIWAGALDEFHMNRTSLSASLDDAIRYGDLVKIEDEDQMLFDFTIVSKPATTSLKE
NNAWKLEKEKEVLGFYLSAHPISMLRERINPNLRTFASLQIYRGYAAFICVIERTRQHRT
KRGDLMLFVVAADETMKFDLVCMPDIYAIHQKDLMKGNYLYVEGKIEKEGSCLVKKITKI
EKEENINP
NT seq 3087 nt   +upstreamnt  +downstreamnt
atgagtgtggccttgcatgttcgaagttcttatacactattacaaagcacattaacgatt
cctcaaattgtagaatgtgcaaaaaaacatggatataaagcagttgctttaacggataag
caagttctgcacggtgccatgcagttttatcatgcctgtaaagaagcagcaataaaacct
attttgggtatggaagtagatgttgtagaaggagaaaatatttttggttttgtattgctg
gcaaaaaatgatgatggttacaaggatttaatgaaattatcaacgcttctaaatacagaa
cagcatgtttctttatctttggaagaattaatgttatatacaaaacattgtgttgttata
acaaatggtgatcaaaataaaatggaaaccatgctgttgaaagaagactgggaggaaatg
aaattatttttagctcaatgtaactcttatttttcagatttttatgtttctatagctaga
aatgacagcccacttttaaaacaaaaaaatgtacaattaaaacgcctttgtaaaagtatg
gaaataaagacagtagcattgtctcggatttatactgcggatgcacaggatgatcttatt
tttaaaacattatgtgcaattaaacaaggggtatctttagaagataaaatgttaaactat
agtccaagacgttattttcgatctcaggaagaaatggaacaattgtatgattctgatgac
cttatgatgagcaatatgatttcagatatgtgcaatgttacaatgtcctttccaaaagca
cagctccctaaatttaaaaaccgctatggtgtgagcagtgatgaatttttgaaaaatctt
tgtcacaaggggttagaaaagcgtatgggatttaaacaaatcccgcaagtttatcaaaag
cgactttcttatgagttggatattattatacgtatgggatttgcggattactttttaatt
gtatgggattttatacgctttgcgaaaacaaaaaacatttatattggacctggacgagga
agtgcagcaggatctctagtatcttattgtttgggaattacacatgcagatcctattcga
tatcacttgctgtttgaacgttttttgaatccggaacgtgtatctatgccggatattgat
accgattttccagatgatcgaagagaagaggtcattcaatatgtatatgaactttatgga
aaacatcatgtagcacatatcattacctttaatacgttaggggcaaagcaggtgttaaga
gatgtagggaaagcaatgatggtaccgataaggcaaattgattctttgtgtcgtttggtg
ccaaacaaattaaaagttactttacaggatgcatatgatgatgagcctcgctttaaacaa
atgataaactcctctgaaaccttaaagaaactatttgctataagccagcgtttagaggga
cttccaagacactcttccttacatgctgcaggtattattttaagtcgtgaacaaatagaa
gaagtatgtcctttgattgatgtggatgaagggatttgtgctacacagtttaccatggaa
tatatggaagaattaggtcttattaaaatggattttttaggacttagaaatttaacgatt
attgatgaaatagtttctcagctgcataaaaatggacatgcaattgatattatgaaaata
cctctaaatgataagaaaacatttgatcttattcaatcggtagatacaatgggggtgttt
cagttagaaagtgaaggaatgaaaagtcttatacgtaaaataaagcctagaaactttgag
gatattgttacaacgattgccttgttcaggccaggacctatggaaaatataccagaatac
ttaaaaagaagagaacatccggacacgattgactatatacatcctgattttaaagatatc
cttgaaaatacatatggaatcatgatttatcaggaacaaatcatgcagattgcacaacgc
atggcaggtttttctttaggaaaagcggataatcttagaaaagccattagcaagaaaaaa
ggagatcagctgcagagttttcgaaaagagtttgtggaaggatctattaaaaaagggtat
gaaaaaacacttgcagagcacgtatacgaattgatcatgaaatttgctaattatggattt
aatcgttctcactctgttgcttatggtatgatcgcatatcaaatggcatatttaaaagca
aatgcgccacagtatttctttcgttctttattaaatagtgtgattggttcagaaataaaa
acaagtgaatatatttttgaagcaaagaaaagaaaactaactgtattgcctccttctgta
aataaaagtagttctttatatgaaatagaacaaaattgcttgcgttttccattacaggga
atcaaagggataggcagtgctgttagtacacaaattttaaaagaaagagaaaaaagagga
gaatttaaagatttctttgattttacagctcgaatgtgcggtaataaaattggaaagaaa
acgatagaacttttgatatgggcgggtgctcttgatgaatttcatatgaatcgtacatct
ttgtctgcttctttagacgatgctatacgttatggtgatttggtaaaaatagaagatgag
gatcagatgttgtttgattttacaattgtaagtaagccggcaacaacttctttgaaagaa
aataatgcatggaagctggagaaagaaaaggaagtattaggtttttatctgtctgcacac
ccgatttctatgctgcgtgagcgcataaaccctaatttaagaacatttgcgtctttacaa
atatatcgtggatatgcagcatttatatgtgttattgaacgaacacgtcagcatcgcaca
aaacgaggagatttaatgttgtttgtggtagcagcagatgaaacaatgaagtttgatctg
gtatgcatgcctgatatttacgcaattcatcaaaaagatttaatgaaagggaattattta
tatgtagaaggaaaaattgaaaaggaaggttcttgtttagttaaaaaaattaccaaaata
gaaaaagaagaaaatattaatccataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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