KEGG   Acetobacter ascendens: A4S02_02570
Entry
A4S02_02570       CDS       T05523                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
aasc  Acetobacter ascendens
Pathway
aasc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:aasc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    A4S02_02570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aasc03021]
    A4S02_02570
   03400 DNA repair and recombination proteins [BR:aasc03400]
    A4S02_02570
Enzymes [BR:aasc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     A4S02_02570
Transcription machinery [BR:aasc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     A4S02_02570
DNA repair and recombination proteins [BR:aasc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      A4S02_02570
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 DOCK-C2 SPG4 DUF6218
Other DBs
NCBI-ProteinID: AOW45829
UniProt: A0A1D8QU18
Position
523076..527248
AA seq 1390 aa
MNAITKSFTGRKRIRKSFGRIPEIAPMPNLIDVQRASYETFLQANVSPDARTPTGLQEVF
RSVFPINDFAGRGRLEFVSYEFEEPKYDVEECIQRGLTYAAPLKVILRLIVWDVDEDTGS
RSIRDIKEQPVYMGDMPLMTDNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKYL
FAARVIPYRGSWLDFEFDAKDLLYVRIDRKRKLPVTTLLYALEGAASEAARKAKAAEGGD
VDSMEIKGMDANEILSYFYNAVTFIKTAKGWARLFDADSFRGLKLLAPLVDAETGEVVAE
AETKLTARMVRKIAEKTREVLVGEIDLLGRYIAHDIVNMQTGEIYGEAGEEITEARLAAL
EEAGITELPLLAIDAANGPWIRDTLTVDKNSSRDEALIDIYRVMRPGEPPTAETAEAMLN
GLFFDPDRYDLSAVGRVKMNMRLDMDVPDTVRVLRKEDILRTIKTLCDLKDGRGQIDDID
NLGNRRVRSVGELMENQYRIGLLRMERAIRERMGSVDIDTVMPHDLINAKPAAAAVREFF
GSSQLSQFMDQTNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEG
PNIGLINSLATYAKVNKYGFIETPYRLVKDGVLQDGWKYLSAMEEEKLVVAQADAKVNDQ
GALTSDLISVRRNGDFRLVPPTEVTACDVSPKQLVSVAAALIPFLENDDANRALMGSNMQ
RQAVPLVRSDAPLVGTGMEAAVARDSGATIVAKRDGIVDQIDGARIVVRATNATGSTQGV
DIYRLRKYSRSNQSTCINQRPLVHVGDNVRAGDIIADGPSTELGELALGRNVLVAFMPWN
GYNFEDSILISERIAKDDVFTSIHIEEFEVMARDTKLGQEEITRDIPNVGEEALRNLDEA
GIVYVGAEVNPGDILIGKVTPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGTSGTI
VDVRVFSRRGVDKDERAMAIERAEIERLAKDRDDERAIQERSFYSRLREKLLGQVAGAGF
KGIRSGTEITDAVLDEHPRATWRQIVVASDSVMAELETLRREFDAAIARIQARFESKVEK
LQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVVSRVVPVEDMPFLEDGTAVD
LVLNPLGVPSRMNVGQILETHLGWACAKIGRGIGDMVDEYQRNGEKRQELLDRLKDVYGD
KVYSEDIANMSNDELVELANNLRKGVPIATPVFDGASIPDIEAMLEKAGVNKSGQSQLID
GRTGEPFERKTTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEME
VWALEAYGAAYTLQEMLTVKSDDVSGRTKVYESIVREQDGFEAGIPESFNVLIKELKSLG
LNVELEQGAE
NT seq 4173 nt   +upstreamnt  +downstreamnt
atgaacgcaatcactaaatcgttcacaggacggaagcggattcgcaaaagtttcgggcgg
attcccgaaatcgccccgatgccgaacctgattgacgtgcagcgtgcgtcttacgagaca
ttccttcaggcgaatgtatcgcctgatgcgcgtactccaacaggtttgcaggaggtattc
cgttccgttttccccatcaatgattttgcggggcgggggcgtctggaattcgtcagttac
gaatttgaagagcctaaatatgatgtggaagaatgcattcagcgtggcctgacgtatgcg
gcaccgttgaaggttattttgcgccttatcgtgtgggatgtggacgaagatacggggtct
cgttccattcgcgatattaaggagcagccagtctatatgggcgatatgccgctcatgaca
gacaacggcacctttatcgtaaacggtacagagcgtgttattgtcagccagatgcaccgt
tcacccggtgtgttctttgatcatgataaaggtaaaacgcattcttccggcaaatatctg
tttgctgcacgcgttattccttaccgtggttcttggctagactttgagtttgacgccaaa
gatctgctttacgttcgtattgaccgtaagcgtaagctgcctgtcactacgctgctgtat
gcgcttgaaggcgcagcatctgaagctgcacgcaaagctaaggcggcggaaggtggtgat
gttgactctatggaaatcaaggggatggatgccaatgaaatcctctcttatttctataat
gctgtcacattcataaaaacagccaaaggctgggcccgtctgtttgatgcggactctttc
cgtggtcttaagctgctggcgccgctggtggatgcagaaaccggtgaagtggtggcggaa
gccgaaaccaagctgacggcccgtatggtgcgcaagatcgcggaaaaaacgcgtgaagtg
ctggtgggtgagatcgatctgcttggccgctacatcgctcatgatatcgtcaatatgcag
actggcgaaatctatggtgaggcaggtgaagaaatcaccgaggcacgccttgctgctttg
gaagaagctggcattacagaacttcctttgctggcgattgatgcagctaacggcccgtgg
atccgtgataccctcacagtagataaaaacagcagccgtgatgaagcgctgattgatatc
taccgcgtgatgcgccccggtgagccgccaacggctgaaaccgccgaagccatgctgaat
ggcctgttctttgatcctgaccgctatgatctttccgccgttggtcgcgtgaagatgaac
atgcgtctggacatggatgtgccagatacagtgcgtgtgctgcgtaaagaagacattctg
cgcaccattaaaacactgtgcgaccttaaagatggtcgcggccagattgacgatattgat
aaccttggtaaccgccgtgttcgctcggttggtgaactgatggaaaatcagtaccgcatt
ggcctgctgcgtatggaacgtgccatccgtgagcgcatgggttctgtggatattgatacg
gtcatgccgcatgatctgatcaacgccaaacctgctgccgctgctgtgcgtgagttcttc
ggttcttcccagctcagccagtttatggatcaaaccaatccgctgtctgaagtcacgcac
aagcgtcgtctatcagcgcttggcccgggtggtcttacccgtgagcgcgcaggctttgaa
gtgcgtgacgttcacccaacgcattatggccgtatctgcccaattgaaacgccggaaggc
ccgaacattggtctgatcaactctctggcaacctatgccaaagtcaacaaatatggcttt
attgaaacgccttaccgcctggtgaaggacggcgtgctgcaggatggctggaagtacctc
tccgctatggaagaggaaaagctggttgttgcgcaggccgatgccaaggtgaacgatcag
ggtgctctgacaagcgatctgatctccgtgcgccgtaacggtgatttccgtctggttcca
ccaacggaagtaacggcgtgtgacgtttctcccaagcagttggtgtctgttgcagcagcg
ctgattccgtttctggaaaacgatgacgcgaaccgtgcactgatgggttccaacatgcag
cgtcaggctgtgccgctggtgcgttctgatgcaccgctggttggcacaggcatggaagct
gctgtggcgcgtgattccggtgcaacaatcgtcgccaagcgtgatggtattgttgaccag
attgacggtgcccgtatcgtggtgcgtgcaacaaacgcaacaggctctacgcagggtgtg
gatatttaccgtttgcgtaagtattcccgttccaaccagtctacctgtatcaaccagcga
cctctggtgcatgttggtgacaatgtgcgggctggcgatattattgccgatggtccttcc
acggagctgggtgaattggcgctggggcgtaacgtgctggtcgcgtttatgccttggaac
ggttacaacttcgaagactccatcctgatttccgaacggattgccaaggatgacgttttc
acctcgatccatatcgaggaattcgaagttatggctcgtgataccaagctgggtcaggaa
gaaatcacgcgtgatattccgaatgtgggtgaagaagccctgcggaacttggatgaagcc
ggcattgtttatgtaggtgccgaagttaatccgggtgatattctcatcggtaaggtgaca
ccaaagggtgaaagcccgatgacaccagaagaaaagcttctgcgtgctatctttggtgaa
aaagcctccgatgtgcgtgatacgtctctgcgtctaccgcctggcacgtctggcacaatt
gtagatgtgcgcgtgttctctcgtcgtggtgtggataaagacgaacgcgccatggctatt
gaacgtgcggaaatcgaacgtctggctaaagaccgtgacgatgaacgcgctattcaggaa
cgttctttctatagccgtctgcgtgaaaaactgctggggcaggttgctggagctgggttc
aagggtattcgctctggaaccgagatcacagatgctgttctggatgaacacccgcgtgct
acgtggcgccagatcgttgttgcttctgacagcgttatggcagagctggaaaccctgcgg
cgtgaatttgatgcggctattgctcgcattcaggcacgttttgaaagcaaggttgaaaag
ctgcagcgtggtgatgaactgccgcctggcgtgatgaagatggtcaaggtctttgtggct
gttaagcgtaagctgcagcctggggataaaatggccggtcgtcatggtaacaagggtgtg
gtttcccgcgttgttcctgttgaagacatgccattcctggaagacggcacagcggttgat
ctggtgctgaacccactgggtgtgccttcacgtatgaacgtggggcagattttggaaacg
catctgggttgggcctgcgccaaaattggccgtggcatcggcgatatggtggatgaatac
cagcgtaatggcgaaaaacgtcaggaactgctggaccgcctgaaagatgtgtatggggat
aaggtttacagcgaagacattgcgaacatgagcaatgatgagctggttgaactggccaat
aacctgcgcaaaggcgtgccgattgcaacgccagtgttcgatggtgcttccattccggat
attgaagccatgcttgaaaaagctggtgtgaataaatccggtcagtctcagttgattgac
gggcgtacgggtgagccgttcgagcgtaaaacaactgttggctacatctacatgctcaag
ctgcaccatcttgttgatgacaagattcatgcacgctctattggcccatactcgctggtt
acacagcagcctctgggtggtaaggcgcagtttggtggtcagcgctttggggaaatggaa
gtgtgggcgctagaagcatacggcgcagcttacactctgcaggaaatgctgactgtgaag
tcggatgacgtttctggccgaaccaaagtttatgaatccatcgtgcgtgagcaggatggt
tttgaggccggtattccggaaagctttaacgttctgatcaaagagctgaagtctctgggt
ctgaacgtagaactggagcagggggccgagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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