KEGG   Aggregatibacter actinomycetemcomitans D11S-1: D11S_0971
Entry
D11S_0971         CDS       T00993                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
aat  Aggregatibacter actinomycetemcomitans D11S-1
Brite
KEGG Orthology (KO) [BR:aat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aat03019]
    D11S_0971
   03009 Ribosome biogenesis [BR:aat03009]
    D11S_0971
Messenger RNA biogenesis [BR:aat03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     D11S_0971
Ribosome biogenesis [BR:aat03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    D11S_0971
SSDB
Motif
Pfam: RNase_T Apc13p
Other DBs
NCBI-ProteinID: ACX82358
Position
complement(889759..890307)
AA seq 182 aa
MSFDKQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAIRQPDALLNKMSE
WCVKTHTANGLIERVKASKLTKRAAELQTLDFLKKYVPKGASPICGNSVAQDKRFLFKYM
PELADYFHYRHLDVSTLKELAARWRPDILNGFNKQNTHLALDDIRESIKELAYYREHFLK
MD
NT seq 549 nt   +upstreamnt  +downstreamnt
atgtcattcgataaacaaaatctgatttggattgatttagaaatgaccggacttgatccg
gaaaaagaacgtattattgaaatcgccaccatcgtgaccgataaaaatttaaacatcctt
gccgagggccctgtccttgctattcgccagcccgatgcgttactgaataaaatgagtgaa
tggtgtgtaaaaacccacacggcaaacggcttgatcgaacgtgttaaagccagcaaactc
accaaacgcgcggcagagctacaaacacttgatttcttaaaaaaatacgttccgaaaggc
gcctccccgatttgtggcaacagcgttgcgcaggacaaacgcttcctgtttaaatacatg
cctgaacttgccgactattttcattatcgccaccttgacgtcagcaccttaaaagaactt
gccgcccgctggagaccggacattttaaacggctttaataagcaaaatacgcatttggcg
ctggacgatattcgtgaatctatcaaagagttagcctattatcgtgaacattttttgaag
atggactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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