KEGG   Aggregatibacter actinomycetemcomitans D11S-1: D11S_2066
Entry
D11S_2066         CDS       T00993                                 
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
aat  Aggregatibacter actinomycetemcomitans D11S-1
Pathway
aat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    D11S_2066
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aat03019]
    D11S_2066
   03016 Transfer RNA biogenesis [BR:aat03016]
    D11S_2066
Enzymes [BR:aat01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     D11S_2066
Messenger RNA biogenesis [BR:aat03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     D11S_2066
Transfer RNA biogenesis [BR:aat03016]
 Prokaryotic type
  tRNA degradation factors
   D11S_2066
SSDB
Motif
Pfam: RNase_PH PNPase RNase_PH_C S1 KH_1 KH_2 S1_2 SLS1_KH2
Other DBs
NCBI-ProteinID: ACX83420
Position
complement(1986122..1988251)
AA seq 709 aa
MNPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVTVVAKKDVKEGQDFFPLTV
NYQERTYAAGRIPGGFFKREGRPSEGETLIARLIDRPIRPLFPEGFFNEIQVVATVVSVN
PQISPDLVAMIGASAALSLSGVPFNGPIGAARVGFINGQFVLNPTMNEQKQSRLDLVVAG
TDKAVLMVESEADILTEEQMLAAVVYGHQQQQVVIEAIKELVAEAGKPRWDWVAPEPNTA
LINKVKALAEARLGDAYRITEKQSRYEQIDAIKADVIAQITAEDEEVSEGKIIDIFTALE
SQIVRGRIIAGEPRIDGRTVDTVRALDICTGVLPRTHGSAIFTRGETQALAVATLGTERD
AQIIDELTGERSDHFLFHYNFPPYSVGETGMIGSPKRREIGHGRLAKRGVAAVMPTLAEF
PYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEEDKFVVLSDI
LGDEDHLGDMDFKVAGTREGVTALQMDIKIEGITAEIMQIALNQAKSARMHILGVMEQAI
PAPRADISDFAPRIYTMKIDPKKIKDVIGKGGAVIRALTEETGTSIDIDDDGTVKIAAVD
KNAVQDVMARIEDITAEVEVGATYKGKVIRLADFGAFVAIVGNKEGLVHISQIAEERVEK
VSDYLQVGQEVMVKVVEIDRQGRIRLTMKDLVPKQDTVQQPADNLFEQE
NT seq 2130 nt   +upstreamnt  +downstreamnt
gtgaatccaattgttaaacagtttaaatacggtcaacataccgtaaccttagaaaccggt
gcgatcgcccgtcaagcaaccgcagcggtcatggcaagcatggacgatacgaccgtattc
gtgactgtggttgctaaaaaagatgtgaaagaaggtcaggatttcttcccattgaccgtt
aattatcaagagcgtacttatgccgccggtcgcattcccggcggtttcttcaaacgcgaa
ggtcgtccgtccgaaggcgaaaccttaattgcccgtttaatcgaccgtccgattcgtccg
ttattcccggaagggtttttcaacgaaattcaagtggttgccaccgtggtatcggtaaat
ccgcaaatcagcccggatttagtggcaatgatcggtgcgtccgccgcgttatctttatcc
ggtgtgccgtttaatggtccgatcggtgcagcgcgtgtgggttttattaacggtcaattc
gtgctaaacccaaccatgaacgagcaaaaacaaagccgtttggatttagtggtggcgggt
accgataaagccgtgttaatggtggaatccgaagcggatattttaaccgaagaacaaatg
ttggcggcggtggtttatggtcatcagcaacaacaagtggtcattgaggccatcaaagaa
ctcgttgccgaagcgggcaaaccgcgttgggattgggttgcgcctgaaccgaacacggcg
ttaattaacaaagtgaaagcgttggcggaagcccgtttaggcgatgcctatcgtatcacc
gaaaaacaatcccgctatgagcaaatcgatgctattaaagcggatgtgattgcacaaatc
accgctgaagacgaagaggtcagcgagggtaaaattattgatattttcaccgcacttgaa
agtcaaatcgtgcgtggccgcattatcgcaggcgaaccgcgtatcgatggccgtactgtt
gacaccgtgcgtgcattggatatttgcaccggcgtattaccgcgtacccacggctccgcg
atttttacccgtggtgaaacccaagccttggcggtggcgactttaggtaccgagcgtgat
gcgcaaattattgatgaattgaccggcgaacgttccgatcacttcctattccactataac
ttcccgccgtactccgtgggtgaaaccggtatgatcggttcaccgaaacgtcgtgaaatc
ggtcatggtcgtttggcaaaacgcggtgtggcggcagttatgccaactttggctgaattt
ccttatgtggttcgtgtggtatccgaaatcaccgaatcgaacggttcttcttctatggcg
tccgtatgtggtgcttctcttgccttaatggatgccggtgtgccgattaaagcggcagta
gcaggtatcgccatgggtttggtgaaagaagaggataaatttgtagtgctttccgatatt
cttggcgatgaagatcacttaggtgatatggacttcaaagttgccggtacccgtgaaggc
gtgactgcgttgcaaatggatatcaaaattgaaggcatcactgcagaaattatgcaaatt
gccctgaatcaggcgaaaagtgcgcgtatgcacattcttggcgtgatggaacaagcgatt
ccggcaccacgtgcggatatttccgattttgcaccgcgtatttacactatgaagatcgat
ccgaagaaaatcaaagatgttatcggtaaaggcggtgcggttattcgtgcgctgaccgaa
gaaaccggcacttccattgatattgatgacgatggtacggtgaaaattgctgcggtagat
aaaaatgcagtgcaggatgtaatggcacgcattgaagacatcactgccgaagtggaagtc
ggcgcaacttacaaaggtaaagtcatccgtttggcggattttggcgcgtttgtggcaatc
gtcggtaacaaagaaggtttagttcatatttcacaaatcgctgaagaacgtgtggaaaaa
gtgagcgattatctacaagtaggacaagaagtgatggtgaaagtggtcgaaatcgatcgc
cagggtcgtatccgtttaactatgaaagaccttgtgcctaaacaagatactgttcaacaa
cctgccgacaacctttttgaacaggagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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