KEGG   Alteromonas australica DE170: EP12_06380
Entry
EP12_06380        CDS       T03858                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
aaus  Alteromonas australica DE170
Pathway
aaus02024  Quorum sensing
aaus03060  Protein export
aaus03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:aaus00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    EP12_06380
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    EP12_06380
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    EP12_06380
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:aaus02044]
    EP12_06380
Enzymes [BR:aaus01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     EP12_06380
Secretion system [BR:aaus02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   EP12_06380
  Eukaryotic Sec-SRP protein
   EP12_06380
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin cobW CbiA AAA_22 KTI12 Peptidase_C23 VirC1 AAA_31 AAA_30 APS_kinase AAA_19 AAA_33 YqeC SLFN-g3_helicase AAA_14 AAA_16 DO-GTPase1 Helicase_RecD TsaE Thymidylate_kin nSTAND3 ABC_tran AAA_24 ArsA_ATPase ATP_bind_1 FliD_C AAA
Other DBs
NCBI-ProteinID: AJP43367
UniProt: A0A075NUS7
Position
1393472..1394908
AA seq 478 aa
MFENLSERLGQTLRNVSGKGRLTEENIKETLREVRMALLEADVALPVVKSFVAQVKERAV
GTEVTKSLKPGQVFIKIVQSELESVMGEANEKLNLATQPPAVILMAGLQGAGKTTSVGKL
AKYLTEREKKKVMVVSADVYRPAAIKQLETLANEVNVAFHPSTILQKPIDIVESAIDEAK
KNFFDVLLVDTAGRLHVDSDMMNEIQELHGAVKPVETLFVVDAMTGQDAANTAKAFNDAL
PLTGVILTKADGDARGGAALSVRHITGKPIKFIGMGEKVDALEPFHPERIASRILGMGDV
LSLIEEVERKVDKSKAEKLAKKVQKGKGFDLQDFKDQLEQMKNMGGMMGMLDKLPGMGAM
TDKIKDQANDKQFNQMEAIINSMTPAERARPEIIKGSRKRRIAAGSGTQIQDVNRLLKQF
TQMQKMMKKMSGGGMKKMMRQMKGMMPPGGGGFGGPGGPGGFGGGPGGFGGGGGFPPR
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgtttgaaaatttatctgaacgccttggtcaaacgcttcgtaatgtgagcggcaaaggg
cgattgactgaagaaaatattaaagaaaccttacgcgaagtgcgtatggcattactggaa
gccgatgtcgctttgccagtggttaagtcatttgttgcacaagttaaagaacgcgctgta
ggtaccgaagtcaccaaaagccttaagcctggtcaagtttttataaagattgttcaatct
gaacttgaatcagtcatgggggaggctaacgaaaagctcaatctcgccacgcaacctcct
gctgttatcttaatggccggtcttcaaggggcaggtaaaaccacctcggtgggaaaactc
gccaaatacttgaccgagcgcgaaaagaaaaaggttatggtggtgagtgccgacgtttat
cgtccggcagcaattaagcagttagaaacccttgctaacgaagtgaatgttgcttttcat
ccttcaaccattcttcaaaagcctatcgacattgttgaaagtgccatcgatgaagcaaag
aaaaatttcttcgatgtactgctcgtagatacggcgggtcgtttgcatgtcgacagtgac
atgatgaatgaaattcaagaattacatggtgcggttaaaccggtagaaaccttgttcgtg
gttgatgctatgacggggcaagacgcggcgaatacagcgaaggcgtttaatgatgcactt
cctctcactggggttatccttaccaaagcagacggtgatgcccgaggtggtgcggcgctg
tctgttcgccacattaccggtaaacctattaaatttatcggtatgggcgaaaaggtggat
gctcttgagcctttccaccctgagcgtatcgcgtcacgaattttaggcatgggcgatgtg
cttagcctcattgaagaagttgagcgcaaagttgataaatctaaagctgagaagttggcg
aagaaagtccaaaaaggcaaaggctttgacttgcaggactttaaagatcagcttgagcaa
atgaaaaacatgggcggcatgatgggaatgcttgataagcttcctggtatgggggccatg
acggacaaaatcaaagatcaagcgaatgacaagcagtttaatcagatggaagccatcatt
aactcgatgacgccggcagaacgcgcacgacctgaaattatcaaaggttcacgtaaacgc
cgtatagcggctggatctggtacccaaattcaagatgttaatcgtcttttgaagcagttt
acgcaaatgcaaaaaatgatgaagaaaatgtctggtggcggaatgaagaaaatgatgcgc
caaatgaaaggtatgatgcctccaggtggtggcggatttggaggtccaggcggtccaggt
ggattcggcggcggtccaggcggttttggcggaggaggcggtttccctccgcgttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (30)   
   Pfam (30)   
All databases (42)   

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