KEGG T03858: EP12

Alteromonas australica DE170: EP12_08425

Entry

EP12_08425        CDS       T03858

Name

(GenBank) exodeoxyribonuclease III

K01142

exodeoxyribonuclease III [EC:3.1.11.2]

Organism

aaus Alteromonas australica DE170

Pathway

aaus03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:aaus00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    EP12_08425
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aaus03400]
    EP12_08425
Enzymes [BR:aaus01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     EP12_08425
DNA repair and recombination proteins [BR:aaus03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     EP12_08425

SSDB

Motif

Pfam:

Exo_endo_phos Exo_endo_phos_2 Tyr-DNA_phospho DUF1801

Other DBs

NCBI-ProteinID:

AJP43687

Position

complement(1808328..1809140)

AA seq 270 aa
MKVISFNINGIRARLHQLQALIDTHQPDVIGLQEIKVHDEQFPVEAVEAMGYQVFFHGQK
SHYGVAFLAKKAPLSVQKGFPTDEEDAQRRMIILKTTDDKGDQVTILNGYFPQGENEKHE
TKYPAKRKFYQDLMHYLNTYHTPDEKVIVMGDVNISHTDLDIGIGEENKKRWLRTGKCSF
LPEERQWLNTLIDWGFEDSFRTLNPDTDDKFSWFDYRSKGFNDNRGLRIDLILATQSLHA
DLSEAGIDYELRGIEKPSDHAPIWATYTSE

NT seq 813 nt +upstreamnt +downstreamnt
atgaaggttatctcttttaatatcaatggcattagagcacgcttacatcagttgcaagca
ttaatagacacccaccagccagacgtaataggtttacaggaaattaaggttcacgacgaa
caatttcccgtagaagcggtggaagccatgggatatcaggtgtttttccacggtcaaaaa
agccattacggcgtggccttcttagcgaaaaaagcacccttgtctgtccagaaaggcttt
cctactgacgaagaagatgcccaaaggcggatgatcattttaaaaaccaccgacgataaa
ggtgatcaggttaccatactaaacgggtatttccctcagggtgaaaatgaaaagcatgaa
accaaataccctgccaagcgcaagttttatcaagatttaatgcattacttgaatacttac
cacacccctgatgaaaaagtgattgtgatgggagatgtgaatatttcacacacagacctt
gatattggcattggggaagaaaacaaaaagcgttggctacgtaccggtaaatgcagcttc
ttacctgaagaaagacaatggctaaacacgctaatagactggggctttgaagacagcttc
agaaccctaaacccagatacagacgataaattctcatggtttgattatcgctcaaaaggc
tttaacgataaccgtggtttacgtattgatttaatattggccacacaaagcttgcacgct
gacttgtctgaagcgggcattgattatgaactgagaggaattgaaaagccctcagatcat
gcgccaatttgggcaacctacactagcgagtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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