KEGG   Alteromonas australica DE170: EP12_11005
Entry
EP12_11005        CDS       T03858                                 
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
aaus  Alteromonas australica DE170
Pathway
aaus03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aaus00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    EP12_11005 (uvrC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aaus03400]
    EP12_11005 (uvrC)
DNA repair and recombination proteins [BR:aaus03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EP12_11005 (uvrC)
SSDB
Motif
Pfam: UvrC_RNaseH_dom UVR GIY-YIG HHH_5 HHH HHH_2
Other DBs
NCBI-ProteinID: AJP44114
UniProt: A0A358E0V5
Position
complement(2396502..2398319)
AA seq 605 aa
MSTFDSAAFLKNLTSQPGVYRMYNAQDEVIYVGKAKNLKKRVSSYFRINVDNAKTRSLVS
QIAKMDVTVVNSETEAFLLENNFIKKYKPRYNVVMRDDKSYPFIFLSDHEHPRLSFHRGP
QKKKGEYFGPYPSAWGVRESLRSMQKIFPVRQCEDSYYRSRSRPCLQYQMQRCSAPCVEG
YVSNEEYADQVALAKLFLKGKNQQVIGTLVEKMESASEQLNFEAAARYRDQINALRKVQE
RQWVAGTQDEMDVFGFAVKGNMACIQVMFIRDSQLLGSKAFFPKVPSTADEQEIFESFFL
QFYLAGNKVIPKQIVLPRELTDDSAIATLLSEEAKYRVTFFKGAREEKRRYLQLAQANAE
TALESQYSAQKSVFARYIDLETALELENPIQRMECFDISHTSGQQTVASCVVFNREGPLK
SDYRRYNIEGITPGDDYAAMAQALKRRYKSVKEVQKIPDLLLIDGGKGQLAQAEAFFEDW
PHDKKPMLLGVAKGTTRKPGLETLILAGNHDVVPMDPHAPGLHLVQHIRDESHRFAITGH
RNRRQKVKTTSSLESIPGIGAKRRQTLLKYMGGLQGLKKASKQEIAGVPGISQDLAETIY
DHLHQ
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgtctacgtttgattcagcagcattcttaaaaaatttaacgtctcagcctggcgtgtac
agaatgtacaacgcccaggatgaagttatttatgtcggtaaggccaaaaacttaaaaaaa
cgggtatccagttacttcaggataaacgtggataacgccaaaacacgttcattggttagc
caaattgcgaaaatggacgtcacggtggttaacagcgaaaccgaagccttcttactagaa
aataacttcattaaaaagtacaagcctcgctataacgtagtgatgcgagatgataagtca
taccctttcatttttttatctgatcacgaacaccctcggctttcattccaccgagggccg
caaaagaaaaagggggagtattttggcccctatccaagcgcttggggggtaagagaaagc
ctgcgctcaatgcagaaaattttccccgttcgtcaatgcgaagatagttattacagaagc
agaagccgcccatgtttgcagtatcaaatgcagcggtgcagcgccccctgtgtggaaggc
tatgtatctaacgaagaatacgctgaccaggtggcactggccaagttattcctcaaagga
aagaaccagcaggttataggtaccttggttgagaaaatggaatctgccagtgagcagctt
aattttgaagcggcagccagatatagagaccaaattaatgcattgagaaaagtgcaggaa
cgccaatgggtagcgggaacccaagacgaaatggatgtatttgggtttgcggtaaaaggc
aatatggcgtgtattcaagtgatgtttattcgagatagccaattgctgggaagtaaagcg
ttttttcctaaagtgccctctaccgccgacgaacaagaaatttttgaatcattcttctta
cagttttatctcgctggcaataaggttattccaaagcaaatagtccttccccgagaatta
accgatgattcagccatagccaccttgctcagtgaagaagcaaagtaccgagtgaccttt
tttaaaggggccagggaagaaaagcgacgttatcttcagttggcgcaagccaatgctgaa
acggcgctagaaagtcagtacagcgcgcaaaaatcggtttttgctcgctatatcgactta
gaaacggcgctagaactcgaaaaccccatacagcgcatggagtgttttgatattagccat
acatcagggcaacaaaccgtggcgtcctgcgtggtgtttaatagagaagggccgttaaaa
agtgattatcgccggtataatattgaaggtattacgcctggcgatgattacgcagctatg
gcgcaggcgctgaagcgacgatacaaatcggttaaagaagtacaaaaaataccggatttg
ctactcattgatggaggaaaagggcagctagcgcaagcagaagccttttttgaagattgg
cctcatgataagaaaccgatgttattaggtgtggcgaaaggcaccacacgaaaacctgga
ttagaaaccttgatcttggcgggtaatcacgatgtggtacccatggacccgcatgcgccc
ggccttcatttagttcaacatatacgtgatgagtcacaccgttttgcaattacagggcat
agaaatagacgacagaaagttaaaaccacgtctagccttgagagcattcctggtattgga
gcaaaacgtagacagaccttgttgaaatatatgggggggttacaaggccttaaaaaagcc
agtaaacaagaaattgcgggtgtacccggtatcagccaagacttggcagagactatttac
gaccatttacatcaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system