KEGG T03925: WYH

Croceibacterium atlanticum: WYH_00279

Entry

WYH_00279         CDS       T03925

Symbol

rsmB_1

Name

(GenBank) Ribosomal RNA small subunit methyltransferase B

K03500

16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]

Organism

aay Croceibacterium atlanticum

Brite

KEGG Orthology (KO) [BR:aay00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:aay03009]
    WYH_00279 (rsmB_1)
Enzymes [BR:aay01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     WYH_00279 (rsmB_1)
Ribosome biogenesis [BR:aay03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    WYH_00279 (rsmB_1)

SSDB

Motif

Pfam:

Methyltr_RsmB-F FtsJ Ubie_methyltran Methyltransf_24 Methyltransf_31 MTS Methyltransf_25 Methyltransf_15

Other DBs

NCBI-ProteinID:

AKH41343

UniProt:

A0A0F7KLA8

Position

266340..267518

AA seq 392 aa
MTPSARIQAAIELLDDIVSAARNQGAPADRLLADWFKARRFAGSKDRRAIRELVYGAIRA
CGPVPESGRAAMLRLAEVDPQIAPLFDGSNYGPQPIADGEQPAAGGVAPGWLAERLAASD
IAGEEAQALLDRAPLDIRVNTLKSDRAGLKLPVAAAPLPAPQGLRLPAGTQVEQWPEYRE
GLIEVQDGGSQLVCAALGAKAGETVIDLCAGAGGKTLALAAAMENKGTLIAADTDRTRLS
RLGPRAERAGALVQGTVLLDPGKEEAALAQWQGKADLVLIDAPCSGSGTWRRNPEARWRL
DEAGLARLTALQARLLRLGAGLVRPGGRLAYVTCSLLDEEGADQIESFHAENPGWAALPP
ACPLGRPRGAGWRLTPSHDETDGFFFALTGKA

NT seq 1179 nt +upstreamnt +downstreamnt
gtgacgccttctgcccgtattcaggcagcgatagagctgctggatgacatcgtttccgcg
gcgcgcaatcagggcgcgcccgcggatcgattgctggcggactggttcaaggcccgccga
tttgccgggtcgaaggaccgccgggccattcgcgaacttgtctatggcgcgatccgtgcc
tgtggcccggtgccggaaagcggccgcgcggccatgttgcggctggcggaagtggacccg
cagattgcgccgctcttcgacggttcgaattatggcccgcaaccgattgccgatggtgaa
cagcctgccgctggcggtgtggcccccggctggctggccgaaaggctggcggcatcggat
attgccggggaagaggcgcaagcgctgctcgaccgggcgccgctggatattcgcgtcaat
acgctgaaatccgatcgggccgggctgaaacttccggtggcggcagcgccgcttccggcg
ccgcagggcctgcgccttcccgccggtacgcaggtggaacaatggccggaatatcgcgaa
gggctgatcgaagtgcaggatggcggcagccagcttgtctgcgcggcactgggggcaaag
gccggggagacggtgatcgatctttgcgccggggccgggggcaagacgctcgcccttgcg
gccgccatggaaaacaagggcacactgatcgccgccgataccgaccggacgcgcctgtcg
cggctggggccgcgggccgaaagggccggggcgctggtgcaggggacagtgctgctcgat
cccggaaaggaagaggccgcgctggcgcaatggcagggcaaggcggatctggtgctgatc
gatgcgccctgttcgggcagtggcacctggcgccgcaatccggaggcacgctggcggctg
gatgaagctggcctggcgcggttgacggcgttgcaggcgcgcttgttgcggctgggggcc
gggctggtccgccccggcggacgattggcctatgtcacctgttccctgctggacgaggag
ggggctgaccagatcgaatccttccatgcggaaaatcccggctgggccgcattgccgcct
gcatgtccgcttggccggccgcgcggcgcgggctggcggctgactccctctcacgacgaa
acggacggatttttcttcgcgctaactggtaaggcatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (49)   

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