KEGG   Acinetobacter baumannii AB031: IX88_05230
Entry
IX88_05230        CDS       T03376                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
abaa  Acinetobacter baumannii AB031
Pathway
abaa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:abaa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    IX88_05230 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:abaa03021]
    IX88_05230 (rho)
   03019 Messenger RNA biogenesis [BR:abaa03019]
    IX88_05230 (rho)
Transcription machinery [BR:abaa03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     IX88_05230 (rho)
Messenger RNA biogenesis [BR:abaa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     IX88_05230 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N Sulfotransfer_1 AAA_22 NACHT AAA_25 OB_RNB AAA Spore_III_AA GpA_ATPase
Other DBs
NCBI-ProteinID: AIL74602
Position
complement(1090188..1091456)
AA seq 422 aa
MNLTELKKKPIGELIKIAEFMGLEGMARNRKQDIIFAILKRHAMNGEEIFGDGVLEILSD
GFGFLRSAAGSYLAGPDDIYVSPSQIRRFNLRTGDTITGTIRPPKEGERYFALLKVNQIN
YDTPENSRNKILFENLTPLFPTEQLVMELGNGTTEDLTARVVDLVAPIGKGQRSIIVAPP
KAGKTMLLQNIAQSIVRNNPEVFLIVLLIDERPEEVTEMERTVRGEVVASTFDEAPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALERPKRF
FGAARNIEEGGSLTIISTALIETGSKMDDVIYEEFKGTGNQEITLDRRIAEKRVFPAMNI
KKSGTRREERLMDEDKLRKVWILRKLLHPMDELAAMEFLLDRMKETKTNDDFFDQMKRKA
ST
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaacttaactgaactcaagaaaaaaccaatcggcgaactaattaaaattgctgaattt
atgggccttgaaggtatggctcgtaaccgaaagcaagatattatctttgccatcttgaaa
cgccatgcgatgaatggcgaagaaatttttggtgacggcgttcttgaaattctctctgat
ggttttggttttttgcgctctgccgcaggttcgtatttagctggtccggatgatatttat
gtgagtccttcacaaatccgacgctttaacttgcgtacaggtgacaccatcacaggtacc
attcgtccaccaaaagaaggtgagcgttattttgctttgctcaaagttaatcaaattaac
tatgacacaccagaaaattcacgtaacaaaatcttatttgaaaacttaactccacttttc
ccgaccgaacaactggttatggaacttggtaatggtacaacagaagacttgaccgcgcgt
gtagtcgatttagttgcaccaatcggtaaaggtcaacgttctattattgtcgctccgcca
aaagcgggtaaaacaatgttacttcaaaacattgctcaatctattgtgagaaacaatccg
gaagttttccttattgttttattaattgatgagcgcccagaagaagtaactgagatggag
cgtaccgtacgcggtgaagtcgttgcttcaacatttgatgaagcaccagcacgtcacgta
caagttgcagaaatggtcattgaaaaagcaaaacgtcttgttgagcacaaaaaggacgtc
gtgattttacttgactctattacacgtttagcccgtgcatacaacacagtaattccttca
tcaggtaaagtattaactggtggtgtggatgcacatgctttagaacgtccaaaacgtttc
ttcggtgctgctcgtaatatcgaagagggcggttctttaacaatcatctctactgctctt
atcgagactggcagtaaaatggatgatgtaatttacgaagagtttaaaggtacaggtaac
caagaaattacacttgatcgccgtattgctgaaaaacgcgtcttccctgccatgaacatt
aagaaatctggcacacgtcgtgaagaacgtttaatggatgaagataaattacgtaaagtt
tggattctccgcaaacttcttcaccctatggatgagttggcagctatggagttcttactt
gatcgtatgaaagaaaccaaaacaaatgatgatttctttgatcagatgaaacgtaaagct
tcaacataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

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