KEGG   Luteitalea pratensis: LuPra_00003
Entry
LuPra_00003       CDS       T04394                                 
Symbol
gyrB_1
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
abac  Luteitalea pratensis
Brite
KEGG Orthology (KO) [BR:abac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:abac03032]
    LuPra_00003 (gyrB_1)
   03400 DNA repair and recombination proteins [BR:abac03400]
    LuPra_00003 (gyrB_1)
Enzymes [BR:abac01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     LuPra_00003 (gyrB_1)
DNA replication proteins [BR:abac03032]
 Prokaryotic type
  DNA Topoisomerases
   LuPra_00003 (gyrB_1)
DNA repair and recombination proteins [BR:abac03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      LuPra_00003 (gyrB_1)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_insert GyrB_hook HATPase_c_3 SH2_2
Other DBs
NCBI-ProteinID: AMY06844
UniProt: A0A143PGF1
Position
2841..5414
AA seq 857 aa
MEPITTPNTESHTPMRTATGTAEDYGAESIKVLEGLEAVRKRPGMYIGTTGEAGLHHLVY
EVVDNSVDEALAGHCSEVNVIIHIDDSITVVDDGRGIPVDMHESGRSAAEVVLTVLHAGG
KFNQEGSAYKVSGGLHGVGVSVVNALSELLELEIWRNGHVYQQVYSRGIPQETLAETGTT
KKRGTKVHFKPDTTIFEATTFSFDTLNNRLRELAFLNAGIIITLEDERGDGKSVRYEYRG
GIVEYVQFMNRAKRAVHEAPIYMRGERNEIDVEIALQWNDSYDENLYTFANNINTHEGGF
HLSGFKAALTRTVNAYIASANIPKDLKDTPISGDDAREGLAGVISVKIPSPQFEGQTKTK
LGNTEVKGIVETIVNEKLGAFFEENPGVAKSIIQKAADAARAREAARKARDLVRRKGALD
GSSLPGKLADCQERDPAQSEIYIVEGDSAGGSAKQGRDRRFQAILPIKGKILNVEKARFD
KMLSSDEIKTMIAALGTGIGRKREETDRDGFDITKLRYHRVIIMTDADVDGSHIRTLLLT
FFYRQMRELVDNGHIYIAQPPLYRAKRGKQEVYIKNDADLEAYLIKRATDSRVLRLLDRG
LEYSGEELEALLHRMIAFDRNLRHVERRGVPQDVVSALLNAGARDREYFSDREKMEALAA
ELTRDQRMVSVVVDEEHNAFFLEIDDRSAGYPRVSRAGVEFAQTPDFRALLNSYRDVSAI
DGRMVIAQVGAVHEEPEETAAEPIEAAAVIETVAEPVRRPAKKDADHEVQSLSDLVGYFL
EIGRKGVAINRYKGLGEMNPDTLWETTMKPEVRTLLQVRAEDQAEADLMFSTLMGDQVEP
RRKFIEDNALDVKNLDV
NT seq 2574 nt   +upstreamnt  +downstreamnt
atggaaccgattaccacgccgaacaccgagtcccacacccccatgcgcaccgccaccggg
acggcggaagactacggcgccgaatcgatcaaggtgctcgaaggcctcgaggccgtgcgc
aagcggccgggcatgtacatcggcacgaccggtgaagccggactgcaccacctggtgtac
gaagtcgtcgacaactccgtcgacgaggcgcttgccgggcactgctccgaagtcaacgtc
atcatccacatcgacgactcgatcacggtcgtcgacgacgggcgcggcattccggtggac
atgcacgagagcgggaggtccgcggccgaggtcgtgctgacggtcctgcacgccggtggc
aagttcaaccaggaaggcagcgcttacaaggtctccggcgggttgcacggggtcggcgtg
tctgtggtcaacgcgctgtcggagttgctcgaactcgagatctggcgcaacggccacgtc
taccagcaggtgtactcgcgcggcattccgcaggaaacgctcgcggagaccggcaccacg
aagaagcgcggcacgaaggtccacttcaagcccgacacgaccatcttcgaggcgaccacg
ttcagcttcgacacgctgaacaaccgcctgcgcgaactcgcgttcctcaacgccggcatc
atcatcacgctcgaggacgagcgcggcgacgggaaatcggtacgttacgaatacaggggc
ggcatcgtcgaatatgtgcagttcatgaaccgcgccaagcgcgcggtccacgaagcgccg
atctacatgcgtggagaacgcaacgaaatcgacgtcgagattgcgctgcaatggaacgac
tcgtacgacgagaacctgtacacgtttgccaacaacatcaacacccacgagggcggcttt
cacctttccgggttcaaggcggcactgactcgtacggtcaatgcctacattgccagcgcc
aacattccgaaggacctgaaggacacgcccatcagcggtgatgacgcccgcgagggcctg
gccggcgtcatcagcgtcaagatcccgagtccgcagttcgaaggccagaccaagaccaag
ctcggtaacaccgaggtcaagggcatcgtcgagacgatcgtcaacgagaaactgggtgcg
ttcttcgaggagaaccccggggtcgccaagtcgatcatccagaaggccgccgacgctgca
cgggctcgcgaggcagcccgcaaggcgcgcgacctggtgcgccgcaagggcgcgctcgac
ggcagttcactccccggcaaactggccgactgccaggagcgcgatcccgcccagagcgag
atctacatcgtcgaaggcgactccgcaggcgggtccgccaagcagggacgagaccggcgc
ttccaggccatcctgcccatcaagggcaagatcctgaacgtcgagaaggcccgcttcgac
aagatgctgagcagcgacgagatcaagacgatgatcgcggcgctcggcacgggtatcggc
cgcaagcgggaggaaaccgaccgcgacggcttcgacatcaccaagctccgctaccaccgc
gtcatcatcatgaccgacgccgacgtcgacggatcgcacatccgtacgctcctgctgacg
ttcttctaccgccagatgcgcgagttggtcgacaacgggcacatctacatcgcccaaccg
ccgctgtatcgcgccaagcgaggcaagcaggaggtctacatcaagaacgatgccgatctc
gaggcgtacctgatcaagcgcgccacggactcacgcgtgctgcgcctgctcgatcgcggc
ctcgaatacagcggcgaggaactcgaggcgctgctgcacaggatgattgccttcgatcgg
aacctgcgccatgtcgagcggcgcggcgtgccccaggacgtggtcagcgcgctgctcaat
gccggcgcccgcgaccgtgagtacttcagcgaccgcgagaagatggaagcactcgccgcc
gaattgacgcgggaccaacgcatggtctccgtcgtcgtcgacgaggaacacaacgcgttc
ttcctcgagatcgacgaccgctccgccggctatccgcgtgtctcgcgcgccggcgtcgag
ttcgcccagacgcccgacttccgggcgctcctcaacagttaccgggacgtctcggccatc
gacggccgcatggtcatcgcacaggtcggcgcggtccatgaagaacccgaggaaaccgcc
gccgagcccatcgaggctgctgccgtcatcgagaccgtggcagaacccgtccgccggccg
gcaaagaaggacgccgaccacgaggtgcagtcgctgtccgacctggtgggctacttcctc
gagatcggccgcaagggcgtggccatcaaccgctacaagggcctgggcgagatgaacccg
gacacgttgtgggagacgacgatgaagccggaagtgcgcacgctgctgcaggtgcgtgcc
gaggatcaggccgaggccgacctcatgttctcgacgctgatgggcgaccaggtagagccc
cgccgcaagttcatcgaggacaacgcgctcgacgtgaagaacctcgacgtctag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (100)   
   KEGG ORTHOLOGY (1)   
   RefGene (97)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (115)   

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