KEGG   Suicoccus acidiformans: CL176_00510
Entry
CL176_00510       CDS       T05652                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
abae  Suicoccus acidiformans
Pathway
abae03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:abae00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CL176_00510
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:abae03021]
    CL176_00510
   03019 Messenger RNA biogenesis [BR:abae03019]
    CL176_00510
Transcription machinery [BR:abae03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     CL176_00510
Messenger RNA biogenesis [BR:abae03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     CL176_00510
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N Spore_III_AA AAA OB_RNB
Other DBs
NCBI-ProteinID: AXY24631
UniProt: A0A347WHS4
Position
106660..107928
AA seq 422 aa
MAGAFDLSTLLNKEAKELYAYARELNIPDYSELSKKELALAIKRTQEEKQGFYQVEGILE
APPGPENYGFIRPLNYSPSQEDVYISNSQIRRFKLRNGDKIAGPARPAKEGERYPSLMQI
STVNGEDPDAAQGRDHFPSLTPLYPDEQIQLSHGQSRIANRMIDIISPIGFGQRGLIVAP
PKAGKTTILKDIANGISANYPNAELLILLIDERPEEVTDIERSVSGDVVSSTFDQKPDNH
IRVANLVLNRAMRLVEASKDVIILLDSITRLARAYNLVVKPSGRTLSGGLDPAAFYFPKR
FFGAARNIENGGSLTILATALSETGSRMDEMIYEEFKGTGNMELHLSRSLAERRIFPAID
IKQSGTRKEELLLSETELENMWQLRKWMGEDTLQYTDQFIQLMSHTKDNTEFFEQLQKAA
QR
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggcaggtgcatttgatttatcaactttactgaataaagaggctaaagaactttatgcg
tatgctcgagaactgaatattcctgattatagcgaattgagcaaaaaggaattagcactt
gcgattaagcgaacgcaagaggagaaacaaggcttctaccaggtggaaggtattcttgaa
gcgcctccagggccagaaaattacggcttcatccgtccattgaattattcgccttcacaa
gaagatgtgtatatttccaattcacaaatccgccgtttcaaattaagaaatggagacaaa
attgctggcccagctcgtccagccaaagaaggcgaacgctatccgagcttgatgcaaatc
tcgacggtaaacggtgaagatcccgatgccgctcaaggacgcgatcactttccgagtttg
acgccgctttatccagatgaacaaattcaattatcccatggccaaagtcgaatcgccaac
cgaatgattgacatcatttcgccaattggctttggtcaaaggggcttaatcgttgccccg
ccaaaggcaggtaagacaacaattctcaaagatattgccaatggtatctcagcgaattat
cccaatgcagaattgcttattctcttaattgatgaaaggccagaagaagtaacggatatt
gaacgcagtgtgtctggggatgttgtcagctccacctttgaccaaaaaccagataatcat
attcgggttgccaatcttgtgcttaatcgggcaatgcgtcttgttgaagcgtctaaagat
gtgattattctcttggacagtattacgcgtttggcgcgagcttataatttagtggttaaa
ccaagtgggcgaactttaagtggcggtttggatcccgcagctttctatttccccaaacgt
ttttttggggctgcccgtaatattgaaaatggcggctccttaaccattctagccaccgct
ctatctgagacagggagccggatggatgagatgatttatgaggaatttaaagggactggg
aatatggagttacatttgtcaagatcactagcagagcgccgtattttccctgcgattgat
attaagcaatctggtacacgtaaggaagaattattgttaagcgagacggagttagagaat
atgtggcaattgcgtaaatggatgggtgaagataccttgcagtatacagaccaattcatt
caacttatgtcacatacgaaggataacacggaatttttcgaacaacttcaaaaggcggcc
caaaggtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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