KEGG   Acinetobacter baumannii BJAB0868: BJAB0868_01222
Entry
BJAB0868_01222    CDS       T02728                                 
Name
(GenBank) DNA polymerase III, epsilon subunit-related 3'-5' exonuclease
  KO
K14159  ribonuclease HI / DNA polymerase III subunit epsilon [EC:3.1.26.4 2.7.7.7]
Organism
abaj  Acinetobacter baumannii BJAB0868
Pathway
abaj03030  DNA replication
abaj03430  Mismatch repair
abaj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:abaj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BJAB0868_01222
   03430 Mismatch repair
    BJAB0868_01222
   03440 Homologous recombination
    BJAB0868_01222
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:abaj03032]
    BJAB0868_01222
   03400 DNA repair and recombination proteins [BR:abaj03400]
    BJAB0868_01222
Enzymes [BR:abaj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BJAB0868_01222
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     BJAB0868_01222
DNA replication proteins [BR:abaj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BJAB0868_01222
    RNase H
     BJAB0868_01222
DNA repair and recombination proteins [BR:abaj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BJAB0868_01222
SSDB
Motif
Pfam: RNase_H RNase_T DNA_pol_A_exo1 Rv2179c-like RVT_3 LPD1
Other DBs
NCBI-ProteinID: AGQ09772
Position
complement(1285255..1286634)
AA seq 459 aa
MSQTITLYVDGACRGNPGLGGWGAYVITEQGEHKLFGGEPDTTNNRMELTAAIEGISFCP
PDAQLIVWTDSNYVKQGITEWIHGWKKKNWKDVKNPDLWQKLDAVCAGRNIEWNWIKGHA
GHAGNEMADQLANLGADKTAQELKQPQSATVSQDIKKPEQDWLLDDPFGFDLVETTEDET
VTLEQTQEVEMIVVDEEMNVVEAVEQEEQQQNTNIHPQIVMTEAKLKLQGPRQLILDTET
TGFYFQDGDRIIEVGAIEMINRKLTGSSIHIYINPEKPVGDSVQVHGITDEFLVDKPKYA
EIADTLFEYLKGAEIIAHNATFDMNFLDMEFKRVGLPALSEVCEVTDTLALAKNKHPGQK
NSLDALVRRYEIPARDRTFHGALLDAEILSDVYLAMTGGQVSFDMDALSQSESDQQKTTK
ARVQIELPVIYPSDEELNIHETWVKEFEKKHGEPCLFAK
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgtctcaaacaatcacactgtatgttgatggtgcatgtcgtggcaatccgggtttaggc
ggttggggtgcatatgtcattaccgaacagggtgaacataaattatttggcggtgaaccc
gacacaacaaataaccgtatggaacttactgcggctattgaaggaatctctttttgccct
cctgatgctcaattaattgtctggacagactcaaattatgtgaagcaaggtattacagaa
tggattcatggttggaaaaagaaaaactggaaagatgttaaaaatcctgacctatggcaa
aaactcgatgccgtttgtgcgggtagaaatattgaatggaactggattaaaggccatgca
ggacatgcaggtaatgaaatggctgaccaacttgcgaatttaggtgcagacaaaactgct
caagaacttaagcaaccacagtcagccactgtatcgcaagatataaaaaagcctgaacaa
gactggttactagacgatcctttcggattcgatctggttgaaacaaccgaagatgaaacg
gtcactttagagcagacacaagaagttgagatgattgttgtggatgaagaaatgaatgta
gttgaggctgtagaacaagaagaacaacagcaaaataccaatattcatccacaaattgtg
atgactgaagccaagcttaaattacaaggcccaagacaactcatactcgatacggaaaca
actggtttctatttccaagatggtgaccgcattattgaagtcggtgccatcgaaatgatt
aaccgtaagcttacgggtagttcgattcacatttatattaatcctgaaaaaccagtgggt
gactctgttcaagtccacggtattactgatgagtttttggtcgacaaaccaaaatatgca
gaaattgcagataccttatttgaatacctaaaaggcgcagaaattattgcccataacgca
accttcgatatgaacttcttagatatggagtttaagcgtgttgggttacctgctctttca
gaagtttgtgaagttaccgatactttagctttagcgaaaaataagcatcctgggcagaaa
aactcacttgatgccttagttagacgttatgaaattccagcgcgtgaccgtactttccac
ggcgcattactcgatgctgaaattctttctgatgtttacttggcaatgacaggtggtcaa
gtttcctttgatatggatgccctatcgcaaagtgaaagtgaccagcaaaaaacgaccaaa
gctagagttcaaattgaattacctgttatttacccttcagatgaagagctaaacatacat
gagacttgggtcaaagaatttgagaaaaaacatggagaaccttgcctttttgcaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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