KEGG   Candidatus Nanopelagicus limnes: B1s21122_05085
Entry
B1s21122_05085    CDS       T05073                                 
Name
(GenBank) glycine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
abam  Candidatus Nanopelagicus limnes
Pathway
abam00260  Glycine, serine and threonine metabolism
abam00630  Glyoxylate and dicarboxylate metabolism
abam00670  One carbon pool by folate
abam00680  Methane metabolism
abam01100  Metabolic pathways
abam01110  Biosynthesis of secondary metabolites
abam01120  Microbial metabolism in diverse environments
abam01200  Carbon metabolism
abam01230  Biosynthesis of amino acids
abam01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:abam00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    B1s21122_05085
  09102 Energy metabolism
   00680 Methane metabolism
    B1s21122_05085
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    B1s21122_05085
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    B1s21122_05085
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    B1s21122_05085
Enzymes [BR:abam01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     B1s21122_05085
SSDB
Motif
Pfam: SHMT Beta_elim_lyase Aminotran_1_2 DegT_DnrJ_EryC1 Aminotran_5 Pyridoxal_deC
Other DBs
NCBI-ProteinID: ASY09695
UniProt: A0A249JYU9
Position
266314..267594
AA seq 426 aa
MSRSEKYYGPDFNALEKQDPEIAAVAISELVRQREDLQLIASENFTSPAVLATMGSSLSN
KYAEGYPGKRYYGGCEEVDKVEVIGIERAKKLFGAEHANLQPHSGASANVAVYQAFTKPG
DTVLAMSLPHGGHLTHGSKVNFSGKWFNVVSYGVRQDNELIDYDQLRDLAVEHKPKMICS
GATAYPSLIDFETVRQICDEVGAIMWVDAAHFIGLVAGKAIPSPVPYADVVSFTTHKVLR
GPRGGMILSKEKHASAIDKAIFPGMQGGPIMSAVAGKAVALKECATVEYQNYAKKVIENC
QELAKGLEAAGMRAVSGGTQTHLALIDIRSTKVNGKIADERCGRSGLSLNKNAIPYDPET
PAVTSGIRVGTAAITTQGMGKPEMNQIASFIARAIKDGEDDSKAKAIRAEVHQLTAKFPV
YPEPKN
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgtctagatctgaaaaatactacggaccagattttaatgcgctagaaaagcaagatcct
gagatcgctgcggtcgcaatctcagagttagttcgtcaacgtgaagatttgcaattaatc
gcaagtgaaaatttcacctcaccggctgtgttagccacgatgggatcatcactttcaaat
aagtatgccgaaggttatccaggaaagcgttattacggtggttgtgaagaagtagataag
gttgaagtaattggtattgaaagagcgaaaaaattatttggcgcagagcatgcaaattta
caaccacactctggtgcaagtgcaaatgttgcggtttatcaagcatttacaaagccagga
gatacggtattggcaatgtctttgccacatggtggtcacttaactcatggctctaaggtt
aatttctcaggtaagtggttcaacgtagtttcctacggcgttcgccaagataacgaacta
attgattacgaccaattgcgagatttagcggttgagcacaagccaaagatgatttgttct
ggagcaactgcctatccaagtttgattgattttgaaacagtacgccagatttgtgatgag
gttggcgcaatcatgtgggtggatgccgctcacttcatcggtttagttgccggtaaagcg
atcccatcaccagtgccatatgcagatgtagtttcatttacaacacataaagtattgcgt
ggaccacgtggtggcatgattttgagcaaggaaaaacatgcatcagctattgataaagca
atctttcctggcatgcaaggtggaccaatcatgagcgcggttgctggaaaagctgtggca
ttaaaagaatgtgcaactgttgagtatcaaaattatgcgaagaaagttattgaaaactgc
caagaattagcaaagggattagaagctgcgggaatgcgtgcagtctctggtggaactcaa
acacatttagcgctgattgatattagatcaacaaaagtaaatggcaagattgcagatgaa
agatgtggaagatctggcctttcactaaacaaaaatgcgattccatacgatccagaaact
ccagctgttacaagtggtattcgagttggaactgctgcgatcacaacccagggaatgggt
aagccagagatgaatcagattgcatcttttattgcccgtgcgattaaagatggtgaagat
gattcgaaagcaaaagcaatacgcgccgaggttcatcaattaacagcaaaatttccagtt
tatccagagccaaaaaactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (14)   
   KEGG PATHWAY (10)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (72)   

Download RDF
DBGET integrated database retrieval system