KEGG   Brevefilum fermentans: CFX1CAM_0307
Entry
CFX1CAM_0307      CDS       T04881                                 
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
abat  Brevefilum fermentans
Pathway
abat00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:abat00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    CFX1CAM_0307 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:abat01007]
    CFX1CAM_0307 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:abat03016]
    CFX1CAM_0307 (lysS)
Enzymes [BR:abat01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     CFX1CAM_0307 (lysS)
Amino acid related enzymes [BR:abat01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   CFX1CAM_0307 (lysS)
Transfer RNA biogenesis [BR:abat03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    CFX1CAM_0307 (lysS)
 Prokaryotic type
   Other AARSs
    CFX1CAM_0307 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: SMX53373
UniProt: A0A1Y6K142
Position
I:complement(338783..340318)
AA seq 511 aa
MLEDTFSELEQVRLKKLRTLEAAGIDPYPTRAEQTHTSQEAIEAFIQVESQPDASPIQVT
VAGRIRSLRPMGKLTFAHIQDRDGKLQLFFRVNDLGEEKMAELSAYYDLGDFIQASGTLF
RTKRGEVSLQVDDFKMLAKALRPLPAAKDEVVDGEIVRHAVLSDPETRYRQRYVDLAVNP
DVQEIFKIRSATVRALQKFLDDHGFIEVETPILQPIYGGAAAKPFVTHHNQLHQDLYLRI
SFELYLKRLLVGGLERVYEIGRDFRNEGVSYKHNPEFTQLEFYWAYADYLMVMDFTEQMV
AFAAEKVLGTTVVNFNGHEINLAPPWRRVDMRQAILEAIDIDIELNPTAESLQAALEARQ
IKHKPGMTRGKLIDALIGDFLEPNFIQPTFLCNYPRDISPLAKSIPGNPSVVERFEGFVG
GMELCNAFTELNNPLDQEQRFIEMGRAYADDDEEQHPMDDDFVNALSYGMPPAGGFGIGV
DRLVMLFTGRRSIREVILFPHLRSQDAEGQG
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgctggaagacacattttctgaacttgaacaggtgcgcctgaaaaaattgcgcaccctg
gaagccgccgggattgacccttaccccacacgtgcagagcaaacgcacaccagccaggag
gcgattgaggctttcattcaggtggaatcacaacctgatgcatctcccatccaggtaacc
gtagctggacgtatccgctcattacgtccgatgggcaagctgaccttcgcccatatccag
gatcgggatggaaaactgcagctctttttccgggtgaacgatttaggtgaagaaaaaatg
gctgaactgagcgcctattacgatttaggcgatttcattcaagccagcggtaccctgttt
cgcaccaaacgcggcgaggtctcgttgcaagtggatgacttcaaaatgcttgccaaagcc
ctgcgacccctgccggcagccaaagatgaggtcgttgacggagaaatcgtccggcatgcc
gttctcagcgatcccgaaacgcgctatcgccagcgttacgtggacctggccgtcaacccc
gatgtccaggagattttcaaaatccgatcggcaactgtgcgggcgttacagaaattcctc
gacgatcacggctttatcgaagtggaaaccccgatcttacagccgatttatggtggtgcc
gccgcgaaacccttcgtcactcaccataaccaactccaccaggacctttatctgcggatt
tcttttgaactctatctcaagcggctgctggtgggcggtttggagcgtgtgtatgagatc
ggtcgcgactttcgcaatgagggcgtctcctataaacacaaccccgaattcacccagctg
gaattttactgggcttatgccgattacctgatggtgatggattttaccgaacagatggtt
gcctttgccgctgaaaaggttctgggaacgaccgtggtcaactttaatgggcatgagatc
aacctggcaccgccctggcgacgcgttgacatgcgccaggctatcctggaggcaatcgac
atcgacatcgaactgaaccccacggctgaatccttgcaggcggctttggaggccagacag
atcaagcataagccgggcatgacgcgcggcaaactgattgatgccctgatcggagatttt
ctggaacccaacttcatccaaccgacttttttatgcaactaccccagggatatctcacct
ttggcgaaaagtattcccggcaatccaagcgtggttgagcgtttcgagggtttcgttggc
ggtatggagctgtgtaatgccttcaccgagctgaacaatccccttgatcaggaacaacgc
tttattgaaatgggtcgtgcctatgctgatgacgatgaagaacagcatcccatggatgat
gactttgtcaacgccctcagctatggcatgccccctgctggcggttttgggatcggggtc
gatcggctggtaatgctattcaccgggcgacgcagcatccgggaagtgatcctgtttccg
cacctgcgcagccaggatgctgagggtcagggataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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