KEGG   Brevefilum fermentans: CFX1CAM_0711
Entry
CFX1CAM_0711      CDS       T04881                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
abat  Brevefilum fermentans
Brite
KEGG Orthology (KO) [BR:abat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:abat03016]
    CFX1CAM_0711 (truB)
Enzymes [BR:abat01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     CFX1CAM_0711 (truB)
Transfer RNA biogenesis [BR:abat03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    CFX1CAM_0711 (truB)
 Prokaryotic type
    CFX1CAM_0711 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB_C TruB-C_2 DKCLD
Other DBs
NCBI-ProteinID: SMX53776
UniProt: A0A1Y6K2I6
Position
I:797597..798514
AA seq 305 aa
MSELDFNLKDTVSGVLVIDKPVGMTSHSVVQVVRQGTGIRRAGHTGTLDPRASGVLVVLL
GPAVRLSEYISASDKRYQAIIRLGETTDTFDGDGEVISRAPVDITLEEIEEALKKFEGRI
EQVPPAYSAKRIHGKKAYELAREGEEVELEPKEIDVYHLELLEWDPPEAIVDVFCSSGTY
VRSLANDLGEALGCGGHLVGLRRTKSGEFALRDAVQLRKLEEAFDYGDWYKYLIPAAEAL
ADWPSRELSTEEVDLVRHGHRVTSETPPENPDHWVRAISEQGELVALMEYLPEENEWQPR
KVFFT
NT seq 918 nt   +upstreamnt  +downstreamnt
atgagcgaactagactttaatcttaaagatacagtttcgggggtactggtgattgataaa
ccagtaggaatgacatctcatagtgttgtgcaggttgtgcgccagggaactggaattcgg
cgagccgggcataccggcacattggatccccgcgcttcgggggtactggtggttctgctt
gggccagctgtgcggctgagtgaatatatctctgcctctgataagcgttaccaggcgatc
atccgcctgggagaaacgactgacacctttgatggagatggcgaagtaatcagccgtgca
ccggtggatatcaccttggaagaaattgaggaagcgttgaaaaaattcgagggcaggatt
gaacaagttccgcccgcctattctgcaaagcgcattcacggaaagaaagcctacgaactg
gcacgcgaaggcgaagaagtagaattggaaccgaaagagattgatgtttaccatcttgaa
ctgcttgagtgggacccgcctgaagctattgttgatgttttttgttcttcgggaacctat
gtgcgctccctggcgaatgatttgggtgaagccctgggttgtggaggtcacctggttggc
ctgcgcaggaccaaaagcggtgaatttgccctcagggatgcggtccaacttagaaaactg
gaagaagcttttgattatggtgactggtataaatatttaatccctgccgctgaagccctg
gctgattggccctctcgtgaattaagcacagaggaagttgatctggtccgccatggtcac
cgtgtgacgagtgagaccccgcctgaaaacccggatcactgggtgcgggcgatcagcgag
caaggtgagctggtggcattgatggagtacctgccagaagagaatgaatggcaaccgaga
aaagttttcttcacttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (42)   

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