KEGG   Acinetobacter baumannii AB030: IX87_05675
Entry
IX87_05675        CDS       T03375                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K14159  ribonuclease HI / DNA polymerase III subunit epsilon [EC:3.1.26.4 2.7.7.7]
Organism
abau  Acinetobacter baumannii AB030
Pathway
abau03030  DNA replication
abau03430  Mismatch repair
abau03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:abau00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    IX87_05675
   03430 Mismatch repair
    IX87_05675
   03440 Homologous recombination
    IX87_05675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:abau03032]
    IX87_05675
   03400 DNA repair and recombination proteins [BR:abau03400]
    IX87_05675
Enzymes [BR:abau01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     IX87_05675
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     IX87_05675
DNA replication proteins [BR:abau03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     IX87_05675
    RNase H
     IX87_05675
DNA repair and recombination proteins [BR:abau03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     IX87_05675
SSDB
Motif
Pfam: RNase_H RNase_T DNA_pol_A_exo1 Rv2179c-like RVT_3 LPD1
Other DBs
NCBI-ProteinID: AIL78140
Position
1076093..1077472
AA seq 459 aa
MSQTITLYVDGACRGNPGLGGWGAYVITEQGEHKLFGGEPDTTNNRMELTAAIEGISFCP
PDAQLIVWTDSNYVKQGITEWIHGWKKKNWKDVKNPDLWQKLDAVCAGRNIEWNWIKGHA
GHAGNEMADQLANLGADKTAQELKQPQSATVSQDIKKPEQDWLLDDPFGFDLVETTEDET
VTLEQTQEVEMIVVDEEMNVVEAVEQEEQQQNTNIHPQIVMTEAKLKLQGPRQLILDTET
TGFYFQDGDRIIEVGAIEMINRKLTGSSIHIYINPEKPVGDSVQVHGITDEFLVDKPKYA
EIADTLFEYLKGAEIIAHNATFDMNFLDMEFKRVGLPALSEVCEVTDTLALAKNKHPGQK
NSLDALVRRYEIPARDRTFHGALLDAEILSDVYLAMTGGQVSFDMDALSQSESDQQKTTK
ARVQIELPVIYPSDEELNIHETWVKEFEKKHGEPCLFAK
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgtctcaaacaatcacactgtatgttgatggtgcatgtcgtggcaatccgggtttaggc
ggttggggtgcatatgtcattaccgaacagggtgaacataaattatttggcggtgaaccc
gacacaacaaataaccgtatggaacttactgcggctattgaaggaatttctttttgccct
cctgatgctcaattaattgtctggacagactcaaattatgtgaagcaaggtattacagaa
tggattcatggttggaaaaagaaaaactggaaagatgttaaaaatcctgacctatggcaa
aaactcgatgccgtttgtgcgggtagaaatattgaatggaactggattaaaggccatgca
ggacatgcaggtaatgaaatggctgaccaacttgcgaatttaggtgcagacaaaactgct
caagaacttaaacaaccacagtcagccactgtatcgcaagatataaaaaagcctgaacaa
gactggttactagacgatcctttcggattcgatctggttgaaacaaccgaagatgaaacg
gttactttagagcagacacaagaagttgagatgattgttgtggatgaagaaatgaatgta
gttgaggctgtagaacaagaagaacaacagcaaaataccaatattcatccacaaattgtg
atgactgaagccaagcttaaattacaaggcccaagacaactcatactcgatacggaaaca
actggtttctatttccaagatggtgaccgcattattgaagtcggtgcgatcgaaatgatt
aaccgtaagcttacgggtagttcgattcacatttatattaatcctgaaaaaccagtgggt
gactctgttcaagtccacggtattacagatgagtttttggtcgacaaaccaaaatatgca
gaaattgcagataccttatttgaatacctaaaaggcgcagaaattattgcccataacgca
accttcgatatgaacttcttagatatggagtttaaacgtgttgggttacctgctctttca
gaagtttgtgaagttaccgatactttagctttagcgaaaaataagcatcctgggcagaaa
aactcacttgatgccttagttagacgttatgaaattccagcgcgtgaccgtactttccac
ggcgcattactcgatgctgaaattctttctgatgtttacttggcaatgacaggtggtcaa
gtttcctttgatatggatgccctatcgcaaagtgaaagtgaccagcaaaaaacgaccaaa
gctagagttcaaattgaattacctgttatttacccttcagatgaagagctaaacatacat
gagacttgggtcaaagaatttgagaaaaaacatggagaaccttgcctttttgcaaaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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