KEGG   Georhizobium profundi: D5400_14435
Entry
D5400_14435       CDS       T05798                                 
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
abaw  Georhizobium profundi
Brite
KEGG Orthology (KO) [BR:abaw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:abaw03032]
    D5400_14435 (topA)
   03400 DNA repair and recombination proteins [BR:abaw03400]
    D5400_14435 (topA)
Enzymes [BR:abaw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     D5400_14435 (topA)
DNA replication proteins [BR:abaw03032]
 Prokaryotic type
  DNA Topoisomerases
   D5400_14435 (topA)
DNA repair and recombination proteins [BR:abaw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      D5400_14435 (topA)
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim zf-C4_Topoisom Toprim_4
Other DBs
NCBI-ProteinID: AZN72316
UniProt: A0A3Q8XRS0
Position
2975123..2977798
AA seq 891 aa
MNVVVVESPAKAKTINKYLGKDFKVLASFGHVRDLPAKDGSVKPDEDFEMSWEVDTASNK
RLKDITDALKGADSLILATDPDREGEAISWHVLEVLNKKKALKGKSVQRVVFNAITKKAV
LDAMANPRDIDAPLVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVCDR
EAEIERFVAEEYWQISADLKTPRNDVFNARLSSYEGKRIQRQTVSNVGEADTIKAMLEGA
SFTVESVEAKPTKRNPAPPFTTSTLQQAASSKLGFNAKRTMQVAQKLYEGIDIGGETVGL
ITYMRTDGVQMDMSAIEAAREEIASNFGDRYRPEKPRFYSTKAKNAQEAHEAIRPTGFER
RPDDVKRYLDQDQIRLYDLIWKRAIASQMASAEIERTTVEIAAKNGDKIAGLRATGSVIR
FDGFIAAYTDQKEDGEQSDDGDDDGRLPEINARETVAKEKINASQHFTEPPPRYSEATLI
KRMEELGIGRPSTYAATLSTLQDREYVEIDKRKLIPQAKGRLVTAFLQNFFERYVEYDFT
ANLEEQLDKISNGDLAWKDVLRAFWKDFFAQIENTKELRVSDVLDVLNEELAPIVFPKRE
DGGNPRICPTCGTGNLSLKLGKFGAFVGCSNYPECNFTRQLSAESANGDEAQLSGEPKDL
GRDPHTGEPITLRSGRFGPYVQRGDGKEAKRSSLPKGWKVEDIDHEKAMALIGLPRDIGK
HPESGKMISAGLGRYGPFLLHDGGYANLETVEDVFTIGLNRAVTVIAERKAKGPARGRTA
TAALKELGEHPDGGAITVRDGRYGPYVNWGKVNATLPKDLDPQAVTLEKALELVAERAGK
SGKKAAPKKAAAKKATPAKKPAAAKKAAPKKKAAAAKTSTEKTSSAKSKEA
NT seq 2676 nt   +upstreamnt  +downstreamnt
atgaacgtcgtcgtcgtcgaatcgcctgccaaggcaaagacaatcaacaaatacctcggc
aaggacttcaaggtcctggcctcgttcggccatgtgcgcgacttgccggccaaggacggc
tcggtgaagccggacgaggatttcgagatgagctgggaggtggataccgcctccaacaag
cgactgaaagacatcaccgacgcgctgaagggcgccgacagcctcattctcgcgaccgac
ccggatcgcgaaggggaagccatttcctggcacgtgctcgaagtgctgaacaagaagaag
gcgctgaagggcaagtccgtccagcgcgtcgtcttcaacgcgatcaccaagaaggccgtg
ctcgatgcgatggccaatccgcgcgatatcgatgcgccgctggtcgatgcctatctggcg
cggcgcgcgctcgactatctcgttggcttcaatctgtctccggttctgtggcgcaaactg
cccggcgcgcgctcggccggccgcgttcagtcggtggcgcttcgtctcgtttgtgatcgc
gaagccgaaatcgagcgcttcgtcgccgaagaatactggcagatcagcgccgacctgaag
acaccgcgcaacgacgtcttcaatgcgcggctctcgtcctatgagggcaagcggattcag
cgccaaaccgtgtcgaatgtcggcgaagccgacacgatcaaggcgatgctcgaaggcgcc
tccttcacggtcgaaagcgtcgaggcaaagcccaccaagcgcaacccagccccgcccttc
acgacctcgaccctgcagcaggctgcatcgtccaagctcggcttcaacgccaagcgcacc
atgcaggtcgcgcagaagctctacgaaggcatcgacatcggcggcgagaccgtcggtctc
atcacctatatgcgaaccgatggcgtgcagatggacatgagcgccatcgaggctgcacgc
gaggagatcgcgtcgaatttcggcgaccgctaccggcccgaaaagccgcgcttctattcg
accaaggcgaagaacgcacaggaagcccacgaggcgatccgccccaccggcttcgagcgc
cgccccgatgacgtgaagcgctatctcgaccaggaccagatccgcctttacgacctgatc
tggaagcgggcgatcgccagccagatggcctcggcggagatcgagcggaccaccgtcgag
atcgccgccaagaatggcgacaagatcgcgggcctgagagccacgggctccgtcatccgc
ttcgacggcttcatcgccgcctacactgatcagaaggaagacggagagcaatcggacgac
ggtgacgacgatggccgtctgccggaaatcaatgcgcgcgaaacggtcgccaaagagaag
atcaacgcatcccagcatttcaccgagccgccgccgcgctactcggaagcgacgttgatc
aagcgcatggaagagctcggcatcggccggccctcgacctatgcggcgacgctttccacg
ctgcaggaccgtgaatatgtcgagatcgacaagcgcaagctgatcccgcaggccaaggga
cgtctcgtcacagcgtttctgcagaacttcttcgagcgttatgtggagtacgacttcaca
gccaatctcgaagagcagctcgacaagatctcgaacggcgatctcgcctggaaagacgtg
ctgcgcgcgttctggaaggacttcttcgcgcagatcgagaacaccaaggaattgcgcgtt
tccgatgtgctcgacgtattgaacgaagagcttgccccgatcgtcttccccaagcgcgaa
gacggcggcaatccacgcatctgcccgacctgcggcaccggcaatctgtcgctgaagctc
ggcaagttcggcgccttcgtcggctgctcgaactatccggaatgcaatttcacccgccag
ctttccgccgagagcgccaatggcgatgaagcgcaactgtccggcgagccgaaggatctg
ggccgcgacccacacacgggcgagccgatcacgcttcgatcgggccgcttcggaccttac
gtccagcggggcgacggcaaggaagcgaagcgctcgagcttgccgaagggctggaaggtc
gaagacatcgaccatgaaaaggcgatggcgctgatcggcctgccgcgcgacatcggcaag
caccccgaaagcggcaagatgatttcggccggcctcggccgctacggtccgttccttctg
cacgatggcggctacgccaatctcgagacggtcgaggatgtcttcaccatcggcctcaac
cgggcggtgacggtgattgcggaacgcaaggccaagggccctgcgcgcggtcgcacagcc
actgctgcgttgaaggagctcggcgagcaccccgatggcggcgcgatcaccgtgcgcgac
gggcgttacggcccctatgtcaactggggcaaggtcaacgcgacgcttccgaaggacctc
gacccgcaggccgtgacgcttgaaaaggcactggagctggtggccgagcgcgccggcaag
agcggcaagaaggctgcgccgaagaaggcggcagccaagaaggcaaccccggccaaaaag
ccggctgctgcaaagaaggccgccccgaagaagaaagcggcagccgccaagacatcgacc
gagaagacaagttcggcaaaatcgaaggaggcgtag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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