KEGG T05798: D5400

Georhizobium profundi: D5400_15085

Entry

D5400_15085       CDS       T05798

Symbol

rnd

Name

(GenBank) ribonuclease D

K03684

ribonuclease D [EC:3.1.13.5]

Organism

abaw Georhizobium profundi

Brite

KEGG Orthology (KO) [BR:abaw00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:abaw03016]
    D5400_15085 (rnd)
Enzymes [BR:abaw01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     D5400_15085 (rnd)
Transfer RNA biogenesis [BR:abaw03016]
Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    D5400_15085 (rnd)

SSDB

Motif

Pfam:

DNA_pol_A_exo1 HRDC

Other DBs

NCBI-ProteinID:

AZN73850

UniProt:

A0A3Q8XUG0

Position

3108085..3109233

AA seq 382 aa
MITSTDALAAACDRLSTSEFVTIDTEFLRETTFWPQLCLIQMASPDLAVIVDPLASGIDL
SPFFKLMADTKITKVFHAARQDIEIIFHLGDLIPHPIFDTQIAAMVCGFGDSISYDQLVA
RITGGRIDKTSRFTDWSRRPLSDTQLEYALADVTHLRDVYLHLKAELEREGRTHWLKEEM
DVLESRETYDLHPDDAWKRLRMRVKKPRELAILQTVAAWREREARARDVPRGRVLKDDAI
YEIAQQAPKDTEALSRLRTIQRGWERSQAGQAVITAVNEALAIPKDDMPRLERSRAAPEG
AGAATELLKVLLKLITEREGVAPKIIANADDLEQIATNGEDADVPALHGWRREMFGDKAL
DLINGRLALRFKEKRVDTLDIG

NT seq 1149 nt +upstreamnt +downstreamnt
atcattacatcgaccgacgcccttgcggccgcctgcgacaggctctccacttccgagttc
gtgacgatcgacacggagtttcttcgcgaaacgacgttctggccgcagctttgcctcatc
cagatggcatcgccggacctcgccgtcattgtcgacccgttggcgagcggtatcgacctc
agcccgttcttcaaactgatggccgatacgaagatcaccaaggtctttcacgctgcacgt
caggatatcgagatcattttccacctgggcgatctcattccccacccgatcttcgatacg
cagatcgcggcgatggtgtgcgggttcggcgattcgatctcctacgaccagctggtggcg
cgcatcaccggtgggcgcatcgacaagacgtcgcgcttcaccgactggagccgcagaccg
ctatcggacacgcaactcgaatatgcgctggccgacgtcactcatctgcgggacgtctat
ctgcatctgaaagccgagttggagcgcgaaggccgcacacactggctcaaggaagagatg
gacgttctggaatcgcgcgagacctacgatctacatcccgacgacgcctggaagcggctg
cggatgcgggtgaagaagcctcgcgaactcgcaatcctacagaccgttgctgcatggcgc
gagcgcgaggcgcgtgcccgcgacgttccgcgcggccgggtgctcaaggacgacgccata
tacgagattgcgcagcaggcgccgaaggataccgaagccttgtcgcgactgcgcaccatc
cagcgcggctgggaacgctctcaggctggtcaggcggtgatcacggccgtcaacgaggca
ctggcgatcccaaaggatgacatgccccgcctggagcgttcgcgcgccgcgcccgagggt
gccggtgcggcaaccgaactcctgaaggtgctcctgaagctcatcacggaacgcgaaggc
gtcgcaccgaagatcatcgcgaatgccgacgatctggaacagatcgcgaccaatggcgag
gatgcagacgtgccggcactccatggctggcggcgcgagatgttcggcgacaaggctctg
gacctgatcaacggtcgcctggcgctgcgtttcaaagaaaagcgcgtggacacactcgac
atcggctaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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