KEGG   Georhizobium profundi: D5400_21185
Entry
D5400_21185       CDS       T05798                                 
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
abaw  Georhizobium profundi
Pathway
abaw03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:abaw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    D5400_21185
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:abaw03400]
    D5400_21185
Enzymes [BR:abaw01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     D5400_21185
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     D5400_21185
DNA repair and recombination proteins [BR:abaw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     D5400_21185
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS
Other DBs
NCBI-ProteinID: AZN73468
UniProt: A0A3S9B8X5
Position
4353512..4354417
AA seq 301 aa
MPELPEVETVRRGLAPAIEGRMIARVEQRRPDLRFPFPENFAARLEGRRIVSLGRRAKYL
LIELDDDAVVVAHLGMSGSFRMETPGAPDPDKDTPGNFHRARSRLTQHDHIVFHLVDEGA
PLTVIYNDPRRFGFMTLIERKADLPIHPHFLGLGREPTGNDLDADYLASRFAGKTAPLKA
ALLDQRVIAGLGNIYVCEALWRSRLSPRRAAGSLVTSSGKPGKRLDALSVAIRDVIADAI
AAGGSSLRDYMQADGALGYFQHSFSVYDREGEPCRREACGGTVRRIVQSGRSTFFCPSCQ
R
NT seq 906 nt   +upstreamnt  +downstreamnt
atgcccgaattgcctgaggtggaaacggtgcggcgcggcctggcgcccgccatagaaggc
cgcatgatcgcccgtgtggaacagcggcgacccgaccttcggtttccgtttcccgagaac
ttcgccgcacgccttgaagggcgccgcatcgtctcgcttggccgacgtgcgaaatatctg
ctgatcgaactcgatgacgatgctgtcgtcgtcgcgcatctcggcatgtcgggatcgttc
cggatggagacacccggtgcccctgatccggataaagacacgcccggcaattttcatcgc
gcccgatcgcgcctcacccagcacgatcacatcgtctttcatctggtagacgaaggggcg
ccgcttaccgtcatttataatgacccgcggcgcttcggcttcatgacactcatcgagcgc
aaggccgatcttccgattcacccgcattttctgggccttgggcgcgagccgaccggcaac
gatctcgacgccgactatctcgcatcgcgttttgcgggaaagaccgctccgctcaaggcc
gcgcttctcgaccagcgggtgatcgccgggcttggcaatatctatgtgtgcgaggcgcta
tggcgctcccgcctgtcaccgcgccgcgccgccggctcgcttgtcacgtccagcggcaag
ccgggcaagcggctcgatgccctgagtgtcgctataagggacgtgatcgccgacgccatc
gctgccggcggctcgtcattgcgcgactacatgcaggcggacggggcgctcggctatttc
cagcacagcttttccgtctacgatcgcgagggcgagccttgccgtcgcgaggcttgtggc
ggtacggtccgccgcatcgtccagagcgggcgatcgacattcttctgccccagctgccag
cggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system