KEGG   Azospirillum brasilense Sp7: AMK58_02430
Entry
AMK58_02430       CDS       T04566                                 
Name
(GenBank) exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
abf  Azospirillum brasilense Sp7
Pathway
abf03030  DNA replication
abf03430  Mismatch repair
abf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:abf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AMK58_02430
   03430 Mismatch repair
    AMK58_02430
   03440 Homologous recombination
    AMK58_02430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:abf03032]
    AMK58_02430
   03400 DNA repair and recombination proteins [BR:abf03400]
    AMK58_02430
Enzymes [BR:abf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AMK58_02430
DNA replication proteins [BR:abf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AMK58_02430
DNA repair and recombination proteins [BR:abf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AMK58_02430
SSDB
Motif
Pfam: RNase_T PAS Rv2179c-like RNase_H_2 DNA_pol_A_exo1 DEDDh_C PAS_8 PAS_4 DUF5927
Other DBs
NCBI-ProteinID: ALJ34371
UniProt: A0A0N7I7F8
Position
complement(536109..538316)
AA seq 735 aa
MSAPATTGSAGAAAPATTPAEPRRIIPLAFRAAGVGLPLLSVGAAVGFSADNDPNAFVTY
AVTMTAAVTAAVWGLWGLVDRRLLRASETLSREAGLIAHGAADGKTGARIPLARYGDLAP
VAKAVNELSDKLAAARRDTARTVAESTAKAEEQKTRLAAVLRDLHEGVLVCNLKHQILLY
NQTALDILHLAGDLGLGRSLLHFVVAEPVIHTLERLTLRVREGRHVNHEHGTTAQFVGAT
TDGHILLAGRMSAILQEPPEGTDEPPTITGYVITLSDATSELAALGQRDALLREATEGFC
APIANLRAVLETLDDTPELGPEERAAFQAALMDSSNTLSERLARVTNAYRSVVTGSWPMS
DIHSTNLINLIRHRVGPEAQYGVTLTGLPQWVHGDSYSLVILFGYLIEYVYALTGVPAYD
LSAEPGDRWVYLDITWRGPSVPSGIVDSWLDHPLPDALGGLTVGDVLQHHKSTMWSEPVK
GPGSEGELLSRLRVPLPPALKPPSAHTAARGGARPEFFDFNLLHQPLATSELGRTPLDQL
HYVVFDTETTGLSPSTGDEIIQIAAVRVVGGRILTGETFNTLVNPKRSIPAESIPFHGIT
DAMVTDKPTIDKVLPQFRGFVSGAVLIAHNAAFDLKFLKMKERVSGVRFDSPVLDTMLLS
RMLLGEGGDHTLDGIAERLGIEVVDRHTALGDSLVTAAVFLRMVEMLKERDVRTLDDAIR
GANIIVELAARERAF
NT seq 2208 nt   +upstreamnt  +downstreamnt
atgagcgcgccggcgaccaccggaagtgccggagccgccgctccggcaaccaccccggcg
gaaccgcgccggatcatccccctcgccttccgcgccgccggcgtcggcctgcccctgctg
tcggtgggggccgcggtcggcttcagcgcggacaacgaccccaacgccttcgtcacctac
gccgtcaccatgaccgccgccgtcaccgccgcggtctggggcctgtgggggctggtcgac
cggcgtctgctgcgcgcctctgaaacgctgagccgcgaggccgggctgatcgcccatggc
gcggcggacggcaagaccggcgcgcgcatcccgctggcccgctacggcgaccttgccccg
gtggccaaggcggtcaacgagctgtcggacaagctggccgccgcccgccgcgacaccgcc
cgcaccgtcgcggagtcgaccgccaaggcggaggagcagaagacccggctggccgccgtc
ctgcgcgacctgcacgaaggcgtcctggtctgcaacctgaagcaccagatccttctctac
aaccagacggcgctcgacatcctgcatctggccggcgacctcgggctgggccgctcgctg
ctgcatttcgtggtggcggagccggtgatccacacgctggagcggctgacgctccgcgtg
cgcgagggtcggcacgtcaaccacgagcatggcaccaccgcccagttcgtcggcgccacc
accgacgggcacatcctgctggccgggcggatgagcgccatcctgcaggagccgccggag
ggcacggacgaaccgccaaccatcaccggttacgtcatcaccttgtccgacgcgaccagc
gagctggccgcgctcggccagcgcgacgccctgctgcgcgaggcgacggagggcttctgc
gcccccatcgccaacctgcgcgccgtgctggagacgctggacgacacgccggagctgggg
ccggaggagcgcgccgccttccaggccgcgctgatggactcgtccaacaccctgtcggag
cggctggcccgcgtcaccaacgcgtaccgcagcgtcgtcaccggctcctggccgatgagc
gacatccactccaccaacctcatcaacctgatccgccaccgcgtggggccggaggcgcaa
tacggcgtgacgctgaccgggctgccgcagtgggtgcacggtgacagctacagcctcgtc
atcctgttcggctacctgatcgagtatgtctacgcgctgaccggggttcccgcctacgac
ctgtcggcggagccgggggaccgctgggtctatctggacatcacctggcgcggcccgtcg
gtgcccagcggcatcgtggacagctggctcgaccacccgctgcccgacgcgctgggcggc
ctgacggtcggcgacgtgctccagcaccacaagagcacgatgtggagcgagccggtgaag
ggaccgggatcggagggcgagctgctgtcgcgcctgcgcgtgccgctgccgcccgcgctg
aagccgccgtcggcccacaccgcggcgcgcggcggggcgcggccggaattcttcgacttc
aacctgctgcaccagccgctggccaccagcgagcttggccgcacgccgctcgaccagctc
cattacgtggtcttcgacaccgagacgacgggcctgtcgcccagcaccggcgacgagatc
atccagatcgccgccgtgcgcgtcgtcggcgggcgcatcctgaccggcgagaccttcaac
acgctggtcaacccgaagcggagcatcccggcggaatcgatccccttccacggcatcacc
gacgccatggtcaccgacaagccgaccatcgacaaggtgctgccgcagttccgcggcttc
gtgtcgggcgcggtgctgatcgcccacaacgctgccttcgacctgaaattcctgaagatg
aaggaacgggtctcgggcgtgcggttcgacagcccggttctcgacaccatgctgctgtcg
cggatgctgctcggcgagggcggcgaccacacgctggacggcatcgccgagcggctgggg
atcgaggtggtggaccgccacacggcgctgggcgacagcctcgtcaccgccgcggtcttc
ctgcgcatggtcgagatgctcaaggaacgcgacgtccgcacgctcgacgacgccatccgc
ggcgccaacatcatcgtcgagctggcggcacgggagcgcgccttttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (22)   

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