KEGG   Alcanivorax borkumensis: ABO_1648
Entry
ABO_1648          CDS       T00380                                 
Symbol
lysS
Name
(GenBank) Lysyl-tRNA synthetase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
abo  Alcanivorax borkumensis
Pathway
abo00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:abo00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    ABO_1648 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:abo01007]
    ABO_1648 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:abo03016]
    ABO_1648 (lysS)
Enzymes [BR:abo01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     ABO_1648 (lysS)
Amino acid related enzymes [BR:abo01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   ABO_1648 (lysS)
Transfer RNA biogenesis [BR:abo03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    ABO_1648 (lysS)
 Prokaryotic type
   Other AARSs
    ABO_1648 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: CAL17096
UniProt: Q0VP02
Position
complement(1882927..1884441)
AA seq 504 aa
MSQDNTTQNVDASQQAAAENRLIAERRAKLAELREGGNPFPNHFRRDSLAADLQAQYGEF
TKEELEEKNIQVAVAGRMMLDRKAFKVLQDMSGRIQIFAPKDETRDVRKETKSWDLGDII
GVRGTLCKSGKGDLYVMMDEYFLLTKSLRPLPEKHKGLTDTEARYRQRYVDLIVNEDTRK
TFQIRAKIVAGIRNFLVQKDFVEAETPMLQVIPGGATARPFITHHNSLDMDMYLRIAPEL
YLKRLVVGGFEKVFEINRNFRNEGLSTRHNPEFTMLEFYQAFGDYHDLMNLTEEMLRTLA
ETVLGSTDVAYQGDVFDFGKPFTRMTVFDSILHFNPDIDAAKLADIEGAREIATGLGIPL
KDGYGLGKVQIEIFEKTVEHRLKDPTFITEYPTEVSPLARRMDDNPFVTERFEFFVGGRE
IANGFSELNDAEDQAERFRQQVEEKAAGDDEAMFYDEDYVVALEHGLPPTAGEGIGIDRL
VMLFTDAPSIRDVILFPHMRPQGR
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgagccaagacaacaccacacagaatgtcgatgcctcgcagcaggccgctgctgaaaac
cgtctgattgcagaacgtcgtgccaagttggccgagttacgcgaaggcggtaacccgttt
cccaatcattttcgtagggattcccttgccgccgatttgcaggcgcagtatggcgaattc
accaaggaagagctggaagagaaaaatattcaggtggcggtagccggccgtatgatgctg
gatcgcaaagcctttaaggtgctacaggacatgtctgggcgcattcagattttcgcgccc
aaggacgaaacccgcgatgtgcgtaaagaaaccaagagctgggatctgggcgacatcatt
ggggtgcgtggcacgctgtgcaaatccggtaagggcgacctgtatgtgatgatggatgag
tattttttgctcaccaaatccctgcgcccgctgcccgaaaagcataaggggctcactgat
accgaagccaggtaccgccagcgttatgtggacttgatcgttaacgaggacactcgaaag
acgttccagatccgcgccaaaattgtggccgggattcgcaactttctggtacaaaaagat
ttcgtggaagcggaaacacccatgctgcaggtgattccaggcggcgcgactgcacgtccg
tttattactcaccacaatagcttagacatggacatgtacttgcgcattgcgccggaactg
tacttgaagcggttggtggtcggcggtttcgaaaaagtgttcgagattaaccgtaacttc
cgcaatgaagggctctcgacccggcataacccggaattcaccatgctggaattttaccaa
gcgtttggtgattaccacgacctgatgaacctgaccgaagaaatgctgcgcaccttggcc
gagacggtgttgggcagcacggatgtggcttaccagggcgatgtgtttgattttggcaaa
ccttttacccgcatgacggtgttcgattccattttgcattttaatcctgatattgatgcc
gccaaattggcagatattgagggcgctcgagagatcgccaccggcttggggattccgctt
aaagacggttacggcttgggtaaggtgcagatcgagatttttgagaagacggtggaacac
cgcctgaaagatcccacctttattaccgagtatcccaccgaggtttcgccgctggcgcgt
cgcatggacgataacccctttgtgacagagcggtttgaattttttgtgggtggtcgtgaa
attgccaacggcttctccgagttgaatgatgcggaagaccaagccgagcgtttccgtcag
caggtggaagaaaaagccgcaggtgacgacgaagccatgttctacgatgaagattatgtg
gtcgcgcttgagcatggcctgccaccgaccgctggtgagggcatcggcatcgatcgtctg
gtaatgttgtttaccgatgcaccgtccattcgtgacgttattctgtttccgcatatgcgg
ccccagggccggtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (46)   

Download RDF
DBGET integrated database retrieval system