KEGG   Agaricus bisporus var. burnettii JB137-S8: AGABI1DRAFT118781
Entry
AGABI1DRAFT118781 CDS       T03136                                 
Symbol
AGABI1DRAFT_118781
Name
(RefSeq) hypothetical protein
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
abp  Agaricus bisporus var. burnettii JB137-S8
Brite
KEGG Orthology (KO) [BR:abp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:abp03016]
    AGABI1DRAFT118781 (AGABI1DRAFT_118781)
Enzymes [BR:abp01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     AGABI1DRAFT118781 (AGABI1DRAFT_118781)
Transfer RNA biogenesis [BR:abp03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    AGABI1DRAFT118781 (AGABI1DRAFT_118781)
 Prokaryotic type
    AGABI1DRAFT118781 (AGABI1DRAFT_118781)
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-GeneID: 18825489
NCBI-ProteinID: XP_007327545
JGI: Agabi_varbur_1_118781
UniProt: K5Y1K7
Position
Unknown
AA seq 550 aa
MVNPEADLDDRPFKRRRMSLEADLEQKDIMEALDTDGAQAETVMEEPSTQELHSKNKGKG
KDTKKKGRRDRRATSYHKENKGGESTWEGTETPEGPKLPRLPKRQCALLIGFCGSGYNGM
QMYPPPLKTIEGTLFKALVEAGAVSQDNANDPVKVALARAARTDAGVHAAGNIVSLKMIM
HVPGIPDLVGRVNELLPPEIRLWGYVRAQNSFNARLACDSRKYTYYFPSYLLIPPKPGSN
LHRVLAQHAESLGHNGSILSHSFWDNPNSSKEDDMRRKRAWRVTQDRIADLRTAAQKFIG
THNFHNFTVGRDASDKSNMRHMKSIEIADPVTHGDTEWVSVLFHGQSFMLHQVRKMMSSL
VLSCRTNTSPNIVTELYKNPDAFIPKMPSLGLLLEEPIFASYNSRMNTVNEKHKPDSPDY
RPMIDFEPYRSQINEFKDQFIYKNMREIEDRDGLFDAWIRMVDNYAGNDLLYLNPEGIIP
DVAIIKKGDKRENPFRERRVFDATSFSEGDHIKTKLQQAEDGRGEDEDGEDGDSDREAKL
DKKQLAETEG
NT seq 1653 nt   +upstreamnt  +downstreamnt
atggtgaatccagaagctgacttagacgatcgtcccttcaagcgtcgccgcatgtctctt
gaagctgatttggaacaaaaggatatcatggaggccctagataccgatggggcccaggca
gaaaccgtaatggaagaaccatcgactcaagagcttcactccaaaaacaagggcaagggc
aaagacacaaaaaagaaaggccgtcgggataggcgcgccacatcttaccataaagaaaat
aaaggcggggagtcgacttgggagggtacggaaacaccagaaggtcccaaactaccgcga
cttcccaaacgtcaatgtgcactcttgattggattttgtggctcaggatacaatggaatg
caaatgtatccacctccactgaaaactatcgaaggtacattgttcaaagccctggtagaa
gccggtgctgtgtcccaggataatgctaatgatccagtcaaggtcgctctggctcgtgct
gcacgaacagatgcaggcgttcatgccgcaggaaacattgtttccttgaagatgataatg
cacgtccccggcattcccgatcttgtcggtcgtgtaaacgaattactacctccagaaatt
agactgtggggctacgtgcgagctcaaaactcgttcaacgcgcgattggcgtgcgacagt
agaaagtacacgtattattttcccagttaccttctcatccctccgaaacccggtagtaat
ctccatcgtgttctcgctcagcatgcagaatcgttaggtcataatggatccatactatca
cactcgttttgggacaatcccaactcgtctaaagaggatgacatgcgaagaaaacgtgct
tggagagttactcaagaccgaatcgcagatttgcgtaccgcagcacagaaattcattggc
acccacaatttccataattttaccgtcggtcgagatgcctcggataaaagcaatatgcgt
cacatgaaaagcattgagattgccgacccagtgactcatggggacactgaatgggtcagc
gtactatttcatgggcaaagtttcatgcttcatcaggtacggaaaatgatgtccagcctg
gtactttcctgtcgtaccaatacatcgccgaatattgtcaccgagctatacaaaaatcca
gatgccttcatacccaaaatgccatcccttggccttctcctcgaggagccaatctttgcg
tcctacaacagcagaatgaataccgtcaatgaaaaacacaaacctgatagtccagattat
cgaccaatgatcgattttgaaccataccgatcacaaatcaacgagttcaaagaccaattc
atctataaaaatatgcgagagatcgaggatcgggatgggctatttgatgcttggattcgc
atggtcgacaattacgccggtaacgacttattatatctcaatcctgaaggaatcattcca
gacgttgcgatcatcaagaagggagacaaaagggaaaacccgttccgtgaacgacgtgtg
ttcgatgcaaccagtttctccgaaggagatcacatcaaaaccaagttgcaacaggccgaa
gatggccgaggtgaggacgaagatggtgaagatggtgacagcgatagagaagcaaagttg
gataaaaagcagcttgctgagacagaaggatag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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