KEGG   Azospirillum baldaniorum Sp245: AZOBR_10501
Entry
AZOBR_10501       CDS       T02152                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
abs  Azospirillum baldaniorum Sp245
Brite
KEGG Orthology (KO) [BR:abs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:abs03016]
    AZOBR_10501
Enzymes [BR:abs01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     AZOBR_10501
Transfer RNA biogenesis [BR:abs03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    AZOBR_10501
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS Corona_NS2A FAT
Other DBs
NCBI-ProteinID: CCC96714
UniProt: A0A9P1JNE3
Position
469226..469762
AA seq 178 aa
MIRLFVALDFPEDVRRRLAGLGGGVPGARWTDADNLHLTLRFIGEVPEDQAAEIDESLAQ
IAAPAFDLVLDGVGVYGSGRNARVLWAGVERSDALSHLQSKVESALVRCGLPAEERKFSP
HVTLARLKDAPKDRIGRFVEERGMFRAGPIRVEHFTLYRSHLGKGAAVYEALSEYGLG
NT seq 537 nt   +upstreamnt  +downstreamnt
atgatccgtctcttcgtcgccctcgattttccggaggatgtgcgccggcgtctggcgggg
ctgggcggcggcgtgcccggcgcccgctggaccgacgcggacaacctgcacctgacgctc
cgcttcatcggggaggtgccggaggatcaggcggcggagatcgacgagtcgctggcgcag
atcgcggcgccggccttcgatctggttctggacggcgtgggcgtctacggcagtggccgc
aacgcccgcgtcctctgggccggggtggagcgcagcgacgccttgtcgcacctccagtcc
aaggtcgagtcggctctggtccgctgcggcttgccggcggaggagcgcaaattctcgccc
cacgtcacgctcgcccggctgaaggacgcgccgaaggaccggatcgggcgcttcgtcgag
gagcgcggtatgttccgcgccggtccgatccgggtggagcacttcacgctctaccgcagc
cacctgggcaagggggccgcggtgtacgaggcgctgtcggaatacgggttgggatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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