KEGG   Amedibacterium intestinale 9CBEGH2: A9CBEGH2_19040
Entry
A9CBEGH2_19040    CDS       T06427                                 
Name
(GenBank) hypothetical protein
  KO
K03092  RNA polymerase sigma-54 factor
Organism
absi  Amedibacterium intestinale 9CBEGH2
Pathway
absi02020  Two-component system
absi02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:absi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    A9CBEGH2_19040
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    A9CBEGH2_19040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:absi03021]
    A9CBEGH2_19040
Transcription machinery [BR:absi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     A9CBEGH2_19040
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD DO-GTPase1 HTH_38 LacI HTH_21 HTH_Tnp_ISL3 Sigma54_AID
Other DBs
NCBI-ProteinID: BBK62964
Position
complement(1948093..1949334)
AA seq 413 aa
MKNVLILKPEIIQKQNYNKSRETSLSMLCMANKDLKLFLYNKASTNPFLSFQTVSDEIIN
YQASAATLSDTILSQLSYLNVELDEDICYYLLSQLDSNGYFRCSMKDLCKQSIYTQKQLE
KVISILQTLDPVGCFCFSLKESLQVQAFACEEAESETAYILCSYLEDLANHNLNHIMEET
QMDVEEIQEGLRFIQSLNPKPASGYASFSQYMEAEASVEVKDGKIQIQLLKQDFTIEIDE
EMQKNKQMQEEYKQLYTEAKNIMNFIQKRNATIMQILQIVCQKQKDYFLHGKALQYCTMQ
QIAKECDVNVSTISRAVTGKMLQFQNRYIPLRYFFVRNGNKEHSQEELVDKIKEYIESEN
PKTPYSDEKLKALLEKEGIYVSRRTIAKYRELAQIENASKRKKRKGEKYERKN
NT seq 1242 nt   +upstreamnt  +downstreamnt
atgaaaaatgtactgattttaaaaccagaaataatccagaagcaaaattataataagtcc
agagaaacatcgttatctatgttatgtatggcaaataaggatttgaaattgtttttatat
aataaagcaagtactaatccttttttgtcgtttcaaactgtaagcgatgagattataaat
tatcaggcttctgcagcgactttatccgatacgattctttctcagctttcttatttaaat
gtagagttagatgaggatatatgttattacttgttatcacagctagattctaatggatat
tttagatgttccatgaaagatttatgcaagcaaagtatatatactcaaaaacaattagaa
aaagtaatttctattttacagacactagatcctgttggatgtttttgcttttctttaaag
gaatcattacaggtgcaggcttttgcctgtgaagaagcagaaagtgaaacagcatatatt
ttatgttcttatttagaggatttagcaaatcataatcttaatcatattatggaagaaacg
cagatggatgtagaggaaattcaagaaggacttcgctttattcaatctttaaatccaaaa
ccggcaagcgggtatgcatctttttcacaatatatggaagcagaagcaagtgttgaagtg
aaagatggaaaaatacaaattcagttattaaaacaagattttactatagaaattgatgaa
gaaatgcagaagaacaaacaaatgcaagaagaatacaagcagttatatacagaagcaaaa
aatattatgaactttatacagaaaagaaatgctacaatcatgcaaattcttcaaatcgta
tgtcaaaaacagaaagattattttttacatggaaaagcattgcagtattgtactatgcag
cagattgcgaaggaatgcgatgtaaatgtttctacaatatccagagcagtaacaggaaaa
atgttacagtttcaaaatcgatatattccattgcgttatttctttgtaagaaatgggaat
aaggagcatagtcaggaagaacttgttgataaaataaaagaatacatagagagtgaaaat
ccaaaaactccatacagtgatgagaaactgaaggcgttgctggagaaagaggggatttat
gtatcgagaagaacgattgcgaaatatagggaattggcacagatagaaaatgcttctaaa
cgaaaaaagagaaagggagaaaaatatgagcgcaaaaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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