KEGG   Aliarcobacter butzleri ED-1: ABED_0003
Entry
ABED_0003         CDS       T01823                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
abt  Aliarcobacter butzleri ED-1
Brite
KEGG Orthology (KO) [BR:abt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:abt03032]
    ABED_0003
   03400 DNA repair and recombination proteins [BR:abt03400]
    ABED_0003
Enzymes [BR:abt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     ABED_0003
DNA replication proteins [BR:abt03032]
 Prokaryotic type
  DNA Topoisomerases
   ABED_0003
DNA repair and recombination proteins [BR:abt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      ABED_0003
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3 EF_HD
Other DBs
NCBI-ProteinID: BAK69720
Position
2567..4888
AA seq 773 aa
MSQQEYGASNIKVLKGLEAVRKRPGMYIGDTNINGLHHLVYEVVDNSIDEAMAGFCRNIK
VTLTKDGWARIEDDGRGIPTAIHPTEGISAATVALTVLHAGGKFDKDTYKVSGGLHGVGV
SVVNALSKHLKMTVYREGKIHYQEFKEGIPQGTLEIIGDSPRKTGTTIEFLVDDSIFEVT
KYEFNILKKRFKEVAYLNPIISITLEDEAAKLKEVYHFEGGIKQFVADMNKETALCEVIS
FSDRVEGVEVDIAMMYNDTYIEKTLSFVNNIRTIDGGTHEAGFKAGLTRSISKYLSENAA
AREKDTKITGDDVREGLIAVVSVKVPEPQFEGQTKGKLGSSYVRPIAQKLTGDNLDKYFE
ENPTHAKAIMEKALMAARGREAAKKARELTRKKDAMTVGTLPGKLAECQSKDPAIRELYL
VEGDSAGGSAKQGRDRVFQAILPLKGKILNVEKSRLDKILKSDEIRNMITALGCGIGEDF
DEEKIRYHKIIIMTDADVDGSHIQTLLLTFFFRFLRPVIEKGYLYIAQPPLYRYKKGKNE
IYLKDNNALSAFLIENGLESFEFEGLGYNDLLDLFKIVSKYRAMLEQLGKRYSLLEVLKH
LIENSDLVNLEFKDLYENIKDFLDKKGYNILSKTVLDDRIQLFVQTNEGLEELIIDEELF
ASPYFSEATYIYSKLKERDLSVFEGRDLIEILEEIETLAKKGAYIQRYKGLGEMNPEQLW
ETTMIPDNRRLLRVKIEDAEVASDTFTLFMGDEVEPRRNYIEEHAKDVEHLDV
NT seq 2322 nt   +upstreamnt  +downstreamnt
atgtcacaacaagaatatggtgctagtaatattaaagttttaaaaggtcttgaagctgtt
agaaaaagaccaggtatgtatattggtgatactaatataaatggtttacatcacttagtt
tatgaagtagttgataactctattgatgaggcaatggctggattttgtagaaatataaaa
gtaactttaacaaaagatggatgggcaagaattgaagatgatggaagaggtattccaact
gcaattcacccaacagaaggaattagtgcagcaactgttgctttaactgtacttcatgct
ggtggaaaatttgataaagatacatataaagtttctggaggacttcatggtgttggggtt
tctgttgtaaatgctttatcaaaacacttaaaaatgacagtttatagagaaggaaaaatt
cattatcaagaatttaaagaaggaattcctcaaggaactttagaaataattggtgatagt
ccaagaaaaactggaacaacaattgaatttttagtagatgattctatttttgaagtaaca
aaatatgaatttaatatcttaaaaaagaggtttaaagaagttgcttacttaaatccaatt
atttctataacattagaagatgaagcagcaaaactaaaagaagtttaccattttgaaggt
ggaataaaacaatttgttgctgatatgaataaagaaacagctttatgtgaagttatatct
tttagtgatagagttgaaggtgtagaagttgatattgctatgatgtataacgatacttac
atagaaaaaactttatcatttgtaaataatattagaactattgatggtggaactcatgaa
gctggatttaaagcaggacttactagaagtatttctaaatatttaagtgaaaatgcagca
gcaagagaaaaagatacaaaaattactggagatgatgtaagagaaggtttaatagcagta
gtttctgtaaaagttcctgaacctcaatttgaaggtcaaacaaaaggaaaattaggaagt
tcttatgtaagaccaattgctcaaaagttaactggagataatttagataagtattttgaa
gaaaatccaactcatgcaaaagctattatggaaaaagctttaatggctgcacgtggaaga
gaagccgctaaaaaagcaagagaattaactagaaaaaaagatgcaatgacagttggaaca
cttccaggtaaacttgcagagtgtcaaagtaaagatccagcaattagagaattatattta
gttgagggagattcagcgggtggttctgcaaaacaaggaagagatagagttttccaagca
attttaccgttaaaaggtaaaattttaaatgttgaaaaatctagacttgataaaatttta
aaatcagatgagattagaaatatgattactgcacttggttgtggtattggtgaagatttt
gatgaagaaaaaatcagatatcataaaattatcattatgacagatgccgatgttgatggt
agccatattcaaacattacttttaactttcttctttagatttttaagaccagttattgaa
aaaggttatttatatattgctcaaccaccactttatagatataaaaaaggtaaaaatgaa
atttatttaaaagataataatgctttatctgcatttttaattgaaaatggtttagaatca
tttgaatttgaaggtttaggatataatgacttattagatttattcaaaattgtttctaaa
tatagagcgatgttagagcaattaggaaaaagatactctttacttgaagttttaaaacat
ttaattgaaaatagtgatttagtaaatttagagtttaaagatttatatgaaaatataaaa
gatttcttggataaaaaaggttataacattttatctaaaacagttcttgatgatagaata
caactttttgtgcaaacaaatgaaggattagaagaactaattattgatgaagaattattt
gcatcaccatattttagtgaagcaacttatatttatagtaaattaaaagagagagattta
tctgtatttgaaggtagagatttaattgaaatattagaagagatagaaacattagctaaa
aaaggtgcttatattcaaagatataaaggtcttggagagatgaatccagagcaattatgg
gaaactactatgattcctgataatagaagacttttaagagttaaaatagaagatgctgaa
gtagcaagtgatacatttactttatttatgggtgatgaagtagaacctagaagaaattat
attgaagaacacgcaaaagatgttgaacatttagacgtatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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