KEGG   Aliarcobacter butzleri RM4018: Abu_0858
Entry
Abu_0858          CDS       T00600                                 
Symbol
dnaQ3
Name
(GenBank) DNA polymerase III
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
abu  Aliarcobacter butzleri RM4018
Pathway
abu03030  DNA replication
abu03430  Mismatch repair
abu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:abu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Abu_0858 (dnaQ3)
   03430 Mismatch repair
    Abu_0858 (dnaQ3)
   03440 Homologous recombination
    Abu_0858 (dnaQ3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:abu03032]
    Abu_0858 (dnaQ3)
   03400 DNA repair and recombination proteins [BR:abu03400]
    Abu_0858 (dnaQ3)
Enzymes [BR:abu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Abu_0858 (dnaQ3)
DNA replication proteins [BR:abu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Abu_0858 (dnaQ3)
DNA repair and recombination proteins [BR:abu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Abu_0858 (dnaQ3)
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 CFAP95
Other DBs
NCBI-ProteinID: ABV67118
UniProt: A8ET44
Position
complement(862557..863375)
AA seq 272 aa
MKSLKKKYILKPKTIFLDILKRLLKEPIAYDEFLNLLEISADRFYDNSNLEFELLLINGL
PLDIKDDFVFLKTTQTLISEQTFCFVDIETNGGTPKKGFQIIELGAVKYKNGEVLDSFNS
LVFAKEIPPYIQEVTKITPAMLETAPRIEKVLKDFKEFLGDDVFIAHDIKFDYNFISDSF
EKYSLGKLLNRKLCTIDLAKRTIKSEKYGLSSLKELLNIDIENHHRAYYDALTTQIVFEK
CLKNIDTNKIKTVEDLINFSKSDSIIKNEIKR
NT seq 819 nt   +upstreamnt  +downstreamnt
atgaaatctcttaaaaaaaaatatatactaaaaccaaaaactatttttttagatatttta
aaaagattattaaaagaaccaatagcttatgatgaatttttaaatcttcttgaaatttca
gctgatagattttatgataatagtaatttggagtttgaacttttactaataaatggttta
cctcttgatataaaagatgattttgtatttttaaaaaccacacaaactttaatttctgaa
caaactttttgttttgttgatatagaaacaaatggtggtactccaaaaaaaggttttcaa
attatagaattgggagctgtgaaatacaaaaatggtgaagttttagatagctttaactct
ttagtttttgcaaaagagattcctccatatattcaagaagttacaaaaataactcctgct
atgttagaaacagctcctagaatagaaaaagttttaaaagatttcaaagagtttttaggt
gatgatgtttttatagcacatgatataaagtttgattacaactttatttcagactctttt
gaaaaatatagtttaggaaaacttttaaatagaaaactttgtacaattgatttagctaaa
agaactataaaatcagaaaaatatggattgagttctttaaaagaacttttaaatatcgat
atagaaaaccatcatagagcatattatgatgcattaacaacgcaaatagtttttgaaaaa
tgtttaaaaaatatagatacaaataaaataaaaacagtagaagatttaataaatttttct
aaaagtgatagtattataaaaaatgagattaaaagatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (32)   

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