KEGG   Aminipila butyrica: Ami103574_13460
Entry
Ami103574_13460   CDS       T06474                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
abut  Aminipila butyrica
Pathway
abut03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:abut00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Ami103574_13460 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:abut03021]
    Ami103574_13460 (rpoB)
   03400 DNA repair and recombination proteins [BR:abut03400]
    Ami103574_13460 (rpoB)
Enzymes [BR:abut01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Ami103574_13460 (rpoB)
Transcription machinery [BR:abut03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Ami103574_13460 (rpoB)
DNA repair and recombination proteins [BR:abut03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Ami103574_13460 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: QIB70236
UniProt: A0A858C189
Position
complement(2835879..2839589)
AA seq 1236 aa
MLTPVTVGRKQRMSFSKIHEVAEMPNLIEIQTESYDWFIREGLYEVFEDISPIKDYAGNL
VLEFIDYSLSDPPKYGQEECKERDVTYAAPLKVKVRLINKETGEVKEQEVFMGDFPLMTE
KGTFIYNGAERVVVTQLVRSPGPYYDVTVDKSNNKLYSTTIIPNRGAWLEYETDSNEIIS
VRVDRTRKQPVTTLLRALGFGSDEEIVAIFGEDPRLRKSLDKDPTDNYEDGLKEIYKKLR
PGEPPTVESAKSFLDALFFDPKRYDLAKVGRYKYNKKLGLSNRIIGAVAAEDVFDPNTGE
ILAEKGQKISRELGFQIENAGVKEIFAYGKNDEDHVTKIIGNRFVELKAYVDFDLSGIKV
EEKVYYPVLMEILSECSTDEEIKEALVLRKHDLSPKHIIIDDIIASVSYILNLNFGIGAV
DDIDHLGNRRLRTVGELLQNQFRIGLARMERVVKERMTIQDIEVTTPQALMNIRPVTAAI
KEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLSRERAGFEVRDVHHSHYGRMCPIE
TPEGPNIGLIGSLTTYGKINEYGFIEAPYRPVDKATGVVKDYIEYLTADEEEMLIIAQAN
EPLDSESHFVNNKVASRGVGGDIDLVPRELIDYMDVSPKQVVSVATAMIPFLENDDANRA
LMGSNMQRQAVPLLIPDAPYVGTGMEYKAARDSGVVILAKNAGTVEYVDATKIRIKRDDG
TGTDHYTMLKFKRANQSTCINQRPIVNHGEHIEKGEIIADGPSTDLGEIALGRNLLIGFM
TWEGYNYEDAIILNERLVMEDKLTTLHIEEYESEARDTKLGPEEITRDIPNVSEEALRDL
DEEGIIRIGAEVQPGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLKVPHGET
GIVVDVKIFSRENGDELPPGVNKLVRCYIITKRKISVGDKMAGRHGNKGVISRILPEEDM
PFMENGEPLQVMLNPLGVPSRMNVGQVLEVHLGLAANFKDWYIATPVFDGANEWDIINLL
KECGYPETGKLTLRDGRSGMPFDNPVTVGYMYMLKLHHLVDDKIHARSTGPYSLVTQQPL
GGKAQFGGQRFGEMEVWALEAYGAAHVLQEILTVKSDDVVGRVKTYEAIVKGENIPEPGI
PESFKVLIKEMQSLGLDVKVLTETDEEIEIRESTELEGISSLENIIDLDDGEETESFEED
FLDDGEEAEDDEEEDDDFDITDLENSEESHDLDDEL
NT seq 3711 nt   +upstreamnt  +downstreamnt
atgctaacacccgttacagtaggtagaaaacagcgcatgagcttctcaaagatccatgag
gtagctgaaatgcctaatcttatcgaaattcagaccgaatcttatgactggttcatcaga
gaaggtctatacgaagtttttgaagacatttcccccatcaaggattatgcaggaaattta
gtcttggaatttatcgattattccttaagcgatccaccgaagtatgggcaggaagagtgc
aaggaacgtgacgtaacatatgcagctccattaaaagtaaaagttcgactgattaataaa
gagactggggaagtgaaggaacaggaagtgttcatgggtgacttcccactgatgacagaa
aaaggtacctttatatataacggtgcggagagagtcgtggtaacgcagttagtacgttct
cctggaccgtattatgatgtgactgtggataagtccaacaataagctctattccaccact
atcattccgaaccgtggagcttggctggaatacgagacggattccaatgaaattatctct
gttcgagtggaccgaaccagaaaacaaccggtgactacgttgctgcgagctttgggcttt
ggctccgacgaggagattgtagctatttttggtgaggacccgagactgcgcaaatccttg
gacaaggacccgacggataattacgaagatggtctcaaggaaatttataaaaaacttcga
cctggcgagccgccaacagtagaaagcgctaagtctttcttagatgcgctcttctttgac
ccgaagcggtatgacttggcaaaggtaggtcggtataagtacaataagaagctggggctg
tccaatcggattattggcgcagtagcagctgaagacgtgtttgacccaaatactggtgag
attctggcagaaaaaggtcagaagatttctagagaattgggattccagattgaaaacgcc
ggcgtaaaggagattttcgcctacggaaagaacgatgaggatcacgtaaccaagatcatt
ggtaaccgtttcgtagagctgaaagcctacgtagactttgacttgtctggaattaaggtt
gaagaaaaggtttattaccctgttctgatggagattctttcagaatgctctacggacgag
gaaataaaggaagctttggttttgagaaaacatgatttatcaccaaagcacattattata
gatgatattatcgcctctgtcagctatattctcaacttgaactttggcatcggtgcggtg
gacgatatcgaccatttaggcaatcgaagactgagaacggttggagaactgctgcaaaac
cagttccgtatcggcttggctcgtatggagcgagtggtaaaggaacgtatgaccattcag
gacattgaggtgacgacaccacaggcgctgatgaacatccgtccggtaactgccgctatc
aaggagttcttcggaagctcccagctgtctcagttcatggaccagactaatccgttggcg
gagttgactcacaagagaagactgtctgccctgggacctggtggattgtccagagagcga
gctggcttcgaagttcgagacgtacaccattctcattatggtagaatgtgtccaattgaa
acaccggaaggtccgaacatcggcttgattggttccctgactacctatggaaagatcaac
gaatacggctttatagaagcgccttaccgaccggtagacaaagccaccggcgtggtaaag
gattacatcgaatatttgacggctgacgaagaagaaatgctgattattgctcaggcaaat
gagccgctggattctgaaagccattttgtaaacaataaagttgcctccagaggggtaggc
ggcgatatcgatttggttccaagagaactgatcgactacatggacgtatccccgaaacag
gttgtatccgtagcgacagcgatgattccattcttggaaaacgatgacgccaaccgagcc
ctgatgggatccaacatgcagcggcaggcggtacctcttttgattccggatgcaccgtat
gtaggtactggtatggaatataaggctgctcgggattccggtgtagtcattctggccaag
aatgctggtacagtggaatacgtagatgcgacgaagattcgcattaagcgggacgatgga
acgggtacggaccattacaccatgctgaagtttaagcgagccaaccagagcacttgtatc
aatcagcgaccgattgtcaaccatggagagcacattgaaaagggtgagatcatcgcagat
ggtccgtccactgacctgggtgagattgctttgggcaggaacctgctcatcggcttcatg
acttgggaaggctacaattacgaggatgcaatcattcttaacgagcgcttggttatggaa
gataagctgactaccctccacattgaggaatatgagtcagaagccagagatacaaagctg
gggcctgaggaaattacgagagatattccgaatgtcagcgaggaagcactgcgagatttg
gatgaagaaggcattatccgtatcggtgccgaggttcagccgggagatatcctggtggga
aaggtgacaccaaagggtgaaacagaactgacggcagaagagcggttgctgcgggcgatc
ttcggtgaaaaggccagagaggtgcgagacacgtccctgaaggtgcctcacggcgagacg
ggtatcgtagttgacgttaaaattttctcccgggagaacggcgatgagctacctccagga
gtgaataaactagtgcgctgctacattattacgaagagaaagattagcgtaggcgacaag
atggccggccgtcacggtaacaagggtgttatctcccggattctgccggaagaggatatg
ccgtttatggaaaacggcgagcctttgcaggttatgttgaacccgctgggcgtaccttct
cgaatgaacgttgggcaggtattggaggtccacttggggctggctgctaatttcaaagat
tggtatattgccacaccagtatttgacggagcgaacgagtgggatatcatcaacctgctg
aaggaatgcggatatccggaaaccggaaagctgactctgcgagatggccgctctggtatg
ccattcgacaatccggtaacagtaggctatatgtatatgctgaaactgcaccatctggtt
gatgacaagattcacgccagaagtaccggtccttactccctggtaacacagcagcctctg
ggcggtaaagctcagttcggcggacagcgtttcggagagatggaagtatgggctctagag
gcctatggtgctgctcatgtgctgcaagaaatcttgacagtgaagtccgatgacgtggta
ggtcgtgtaaagacttacgaagccattgtaaagggcgaaaacattcctgagccgggcatt
ccagaatcctttaaggttctgattaaggaaatgcagagtttaggtctggacgtgaaggtc
ctcacagaaacggatgaagaaattgagattagagaatccaccgagctggagggaatatcc
agcttagagaatatcatcgacttagacgacggagaagagacggaatcttttgaagaagat
ttcttggacgacggcgaagaggcagaagatgatgaggaagaggatgacgatttcgacata
acggatcttgaaaacagtgaagagagccacgatcttgatgatgagttatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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