KEGG   Agaricus bisporus var. bisporus H97: AGABI2DRAFT188010
Entry
AGABI2DRAFT188010 CDS       T03140                                 
Symbol
AGABI2DRAFT_188010
Name
(RefSeq) hypothetical protein
  KO
K01855  tRNA pseudouridine38/39 synthase [EC:5.4.99.45]
Organism
abv  Agaricus bisporus var. bisporus H97
Brite
KEGG Orthology (KO) [BR:abv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:abv03016]
    AGABI2DRAFT188010 (AGABI2DRAFT_188010)
Enzymes [BR:abv01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.45  tRNA pseudouridine38/39 synthase
     AGABI2DRAFT188010 (AGABI2DRAFT_188010)
Transfer RNA biogenesis [BR:abv03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    AGABI2DRAFT188010 (AGABI2DRAFT_188010)
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-GeneID: 18080865
NCBI-ProteinID: XP_006455877
JGI: Agabi_varbisH97_2_188010
Position
Unknown
AA seq 612 aa
MTTNQRSADYSAWSREQLIERLIALESPKLVKESRPSVSPASIIPVPPRKHNENQNTIPP
PTNIIRPPSKEFNFSNHPKRKIALKFCYSGWEYGGLAYQTGPTQLPTVEAVLFEALAKAR
LIDRDGGMEGCRWEKCGRTDKGVSAAGQVISLWLRSAVGSVEEGQGKGKGKEVGLVNQVE
EGSTNQHQDSGLPGLSEEDFGTLDLSEPGSPIEATKILQDSSSKSRHELDYVGILNRLLP
PTIRILAWAPVAENFSARFSCKYRHYKYFFSSHLLDISAMREAATHLIGEHDFRNLCKVD
AQKQITMFRRNILRADIEPVIDPSGNNGEGMFVFNLVGSAFLYHQVRHIMAILFLVGTGL
EEPSLVTKLMNVFDGAENRDLAICETRLEVLDRKPEYQMADALPLMLWDCAYAEEDVKWR
TGTLEPSAQDHNHDTDEHSRRCGLGTESNLYLQLHSIWNRSRIYNVLDGHFLRAAEAHHR
PPTSPLPLITGTSLNHPSSLNYPLGGGTYKRVQKYVPVLTRNRLDTVEMINERWRNGKGS
RKAEKRAFVFKTENIRISAVNRSEHFWRNDGRNKALKIHPALPHPPTLESEAKEIIANFR
SLTVTFSGRWVI
NT seq 1839 nt   +upstreamnt  +downstreamnt
atgactaccaatcagcgttcggccgactatagtgcctggtcccgtgaacaacttattgaa
cgcctcatagctctcgaaagtcccaaattggtgaaggaatctagaccttctgttagtcct
gcgtcgatcattccagttcctccgcgaaaacacaatgaaaaccaaaatacgattccacca
ccaactaatatcatccgtccaccttcaaaagaattcaacttttccaatcatccgaaacgg
aaaatcgctctaaagttttgttattccggatgggaatatggtggacttgcatatcagact
ggtcctacccagctgcctacggttgaggctgtgttgttcgaagcactcgcaaaagcgaga
ttgatcgatcgtgatggggggatggagggttgtaggtgggagaagtgtggaagaacggat
aaaggtgtgagtgctgccgggcaggtcatttcgctttggctcaggagtgctgttgggagt
gtcgaggaagggcaaggaaaggggaagggcaaggaagttggacttgtaaatcaagtagag
gagggcagtacgaatcaacaccaagattctggtttaccaggactttctgaagaagacttc
ggaacgctggacctttcagagccaggctcgcctatagaagctacaaaaatacttcaagat
tcgtcctctaaatcacggcatgaactcgattatgtcggcatcctcaatcgtctactacct
cctacaattcgcattcttgcctgggcaccagttgctgaaaacttctcagcccgcttttct
tgcaaataccgacattacaaatacttcttctcttcgcatcttctcgatatctccgccatg
cgtgaagcagcaacacatttaatcggcgaacatgatttcagaaatttgtgtaaagttgac
gctcagaagcagattacgatgtttcgtcgcaatattttgcgtgccgacattgaacctgtc
atcgacccgagcggtaacaatggtgaagggatgttcgtttttaatttggttggcagtgct
tttctataccatcaagtccgacatatcatggctatcctatttctggtcggaactggtctt
gaagaaccatcgctagtaaccaaactgatgaatgtgtttgatggagccgagaatcgtgat
cttgctatctgcgaaacaagattggaggttttagataggaaacctgagtatcagatggct
gatgcgttaccactgatgctttgggactgcgcctatgctgaggaagatgtgaagtggaga
actggtacccttgaaccttctgctcaagatcacaatcatgatacggacgagcattcaaga
cgctgcggactgggaacggaatcgaatctatatctccaactacattcaatatggaatcgc
tctcgcatatacaatgttttagatggacactttcttcgggccgctgaagcgcaccataga
ccccccacttcccctctccctctaattactgggacgtctctgaaccacccttcatcactg
aattatccgcttggcggagggacatacaagagagtccaaaaatacgttccggtgttaacg
aggaatcgattggatacggtggagatgattaatgaaaggtggagaaatgggaagggctcg
aggaaagccgagaagagagctttcgtattcaagaccgaaaatattcgcatatctgccgtg
aacagatctgagcatttttggcggaatgatggaaggaataaggcgttaaaaattcatcct
gccctccctcatccgccaacgctcgaaagcgaagccaaagaaataattgcgaactttaga
agcctgacagtgacattttcggggagatgggtgatatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system