KEGG   Acinetobacter baumannii 1656-2: ABK1_1426
Entry
ABK1_1426         CDS       T01819                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
abx  Acinetobacter baumannii 1656-2
Pathway
abx02024  Quorum sensing
abx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:abx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ABK1_1426
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    ABK1_1426
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:abx03019]
    ABK1_1426
   03036 Chromosome and associated proteins [BR:abx03036]
    ABK1_1426
Messenger RNA biogenesis [BR:abx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     ABK1_1426
Chromosome and associated proteins [BR:abx03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    ABK1_1426
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: ADX03060
Position
1530295..1530813
AA seq 172 aa
MELKMSKGQTLQDPFLNSLRKERIPVSIFLVNGIKLQGHIESFDQYVVLLKNTVSQMVYK
HAISTVVPARNPRPAGAQGAGFPAQGGSQGGFGGQGAGFGGAQGAGFGGQGGFGGQGGFG
GQGGFGGQGGFGGQGGFGGQGGFGGQGGFGGHQGGFDNDSKFEDGQDDENNR
NT seq 519 nt   +upstreamnt  +downstreamnt
ttggagttaaaaatgtctaaaggtcaaactttacaagatccgttcttaaattctctccgt
aaagaacgcatcccagtttctattttccttgttaacggtattaaattacaaggtcatatt
gaatcttttgaccaatatgttgttttattaaaaaatactgtaagtcaaatggtttacaaa
cacgcaatttctacagttgttccagctcgcaacccacgtccagcaggtgcacaaggtgca
ggtttcccagctcagggtggtagtcaaggtggcttcggtggtcaaggcgctggctttggt
ggtgctcaaggtgctggcttcggtggtcaaggtggctttggtggtcaaggcggcttcggt
ggtcaaggtggcttcggtggtcaaggtggcttcggtggtcaaggtggcttcggtggtcaa
ggcggctttggtggtcaaggcggcttcggcggacatcaaggcggttttgataacgattct
aaatttgaagatggtcaagacgacgaaaacaatcgttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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