KEGG   Acidobacterium capsulatum: ACP_1875
Entry
ACP_1875          CDS       T00868                                 
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
  KO
K01669  deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Organism
aca  Acidobacterium capsulatum
Brite
KEGG Orthology (KO) [BR:aca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aca03400]
    ACP_1875 (phrB)
Enzymes [BR:aca01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     ACP_1875 (phrB)
DNA repair and recombination proteins [BR:aca03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    ACP_1875 (phrB)
 Prokaryotic type
    ACP_1875 (phrB)
SSDB
Motif
Pfam: DNA_photolyase FAD_binding_7
Other DBs
NCBI-ProteinID: ACO33611
UniProt: C1F868
Position
complement(2216737..2218149)
AA seq 470 aa
MPRALQQFSQDARVTVRRNGAPLPQGKCVVYWMQRAQRALDNPALDMAIRIGNELGLPVV
AYFSAISNFPHANLRHYVFLNQGLADIEEDMAERNVTFIVRRPPGNSLEQLLEEVQAAML
IGDENPCREPERWRQVIAKRLNMPYWTIDADVVVPSNLFPKHQYMVHIFRKRFEPLLPQY
LVPQPVIQAEKSWPHPKGFEAFDVRHDVTEGWSKFDRSVKPVDSFHGGTHEAQRLLKDFV
TNKLANYPKERNHPELDGTSRLSPYLHFGHISPLTIALAVEDAHKNKHASREACDSYLNE
LIAWRDMAVNFVKFVPGYDSFEAAPEWAQKTLREHARDTRDPIYTLEELERAETCDELWN
AAQRQMLHAGWMHNYMRMYWAKKILEWSPSPVQAWETCVYLNDRYFLDGRDPNGYAGIAW
AIGGVHDRPWFERDIFGTIRYMSGNAAAKKFDATRYIRQMEELAESAQAE
NT seq 1413 nt   +upstreamnt  +downstreamnt
gtgcctcgggcactgcagcaattcagccaggatgcgcgggtgacagtgcgccgcaacggc
gctccgcttcctcagggcaagtgcgtcgtctactggatgcagcgcgcgcagcgggccctc
gacaatcccgcgctcgacatggccattcgcatcggcaacgaactgggccttcccgtcgtg
gcttacttttccgcaatctctaatttccctcacgcgaatctgcgtcattacgtgtttctg
aatcaggggctggccgacattgaagaggacatggccgagcgcaacgtaaccttcatcgtg
cgccgccctccgggcaattcgttggagcagctattggaagaagtgcaggccgccatgctc
atcggcgatgaaaacccctgccgcgaaccagagcgctggcgtcaggtgatcgccaaacgc
ctgaacatgccttactggaccattgatgccgatgtcgtcgtaccgtcgaatctctttcca
aagcaccagtacatggtgcatatcttccgcaaacgctttgagcctctgctgccgcagtat
cttgttccgcagcctgtcatccaagccgaaaaatcctggccgcatcccaaaggcttcgaa
gccttcgacgtccggcacgatgtcactgaaggctggagcaaattcgaccgcagcgtgaag
ccggtggactcctttcatggaggcactcacgaagcgcagagactgctcaaggatttcgta
accaataaattggcaaattaccccaaagagcgaaaccatcccgaactggatggcaccagc
cgcctctcgccctatctgcattttggccacatcagcccgttgacgattgccctcgccgtc
gaggatgcgcacaagaacaagcacgcatcgcgcgaggcttgcgacagttatctcaatgag
ctgattgcgtggcgcgacatggcggtcaacttcgtaaagttcgtgccgggttacgattcc
tttgaggccgctcccgagtgggcgcaaaagacgctgcgcgagcacgcaagagatacccgc
gatcccatttatacgctcgaagagctggagcgcgctgaaacatgcgacgagctgtggaat
gccgctcagcgccagatgctccacgccggctggatgcacaactacatgcgcatgtactgg
gccaagaagattcttgagtggtcgccttctccggtgcaggcatgggaaacctgtgtctat
ctgaacgaccgctacttccttgatggccgcgatcctaatggatatgcgggcatcgcctgg
gccatcggcggcgtgcatgaccgcccatggtttgaacgggatatcttcggcaccattcgc
tatatgtcaggcaatgcggcggcgaagaagtttgacgcgacgcgctatatccggcagatg
gaagagttagccgagtccgcgcaggctgagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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