KEGG   Acidobacterium capsulatum: ACP_2222
Entry
ACP_2222          CDS       T00868                                 
Name
(GenBank) tRNA nucleotidyltransferase/poly(A) polymerase family protein
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
aca  Acidobacterium capsulatum
Pathway
aca03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aca00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ACP_2222
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aca03019]
    ACP_2222
Enzymes [BR:aca01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     ACP_2222
Messenger RNA biogenesis [BR:aca03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     ACP_2222
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd HD tRNA_NucTran2_2
Other DBs
NCBI-ProteinID: ACO32752
UniProt: C1F9R3
Position
2582920..2584308
AA seq 462 aa
MPSTPIPFSSFPASPAFRAAAHIVAHLRAHGYEAYFAGGCVRDMLLGHPPKDYDVTTRAR
PDVVLALFPRTYAVGAHFGVVLVADEIDGQPITTEVATFRSDGAYLDGRRPSEVAFADRP
EDDVLRRDFTINGMLLDPEKWQQTGSLDDAVLDFVDGRADLSAGIVRAIGHAERRFTEDK
LRMLRAVRFAARFGYELEPETFAALRQLAPGIAQVSRERVRDELTRMLTEGHARHAFELL
DASGLLREVLPEIDRLHGVEQPPQYHPEGDVWVHTLLLLEKLAPGCPATLAWGALLHDVG
KPATFERAPDRIRFSGHVEVGVKIAAEICRRLRFSNDETEQILALVENHMRFGDIQRMKP
STLKRFFRLPGFDEHLELHRIDCLSSHGDLTLYEFAQQQYHALPPEAVRPPLLVTGRDLI
EAGYQPGPQFRQWLALAEDAQLEGRIHSREEGLALIREAAAL
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgccctccacgcccatcccgttctcgtctttcccggcatccccggcctttcgcgccgcc
gcgcacatcgtcgcccatctgcgcgcccacggctatgaggcatactttgccgggggatgc
gtccgtgacatgctgctcggccacccgcccaaggactatgacgtcaccactcgcgcccgt
ccggacgtggtgcttgcgctctttccgcgcacctatgccgttggcgcgcacttcggcgtc
gtgctggtcgccgatgaaatcgacggccagcccatcaccaccgaggtggccacctttcgc
agcgacggagcgtacctcgacggacgccgcccctctgaggtcgcctttgccgaccggcct
gaggacgatgtgctccgccgcgacttcaccatcaacggcatgctgctcgacccggaaaag
tggcagcagaccggctcgctcgacgacgctgtgctcgactttgtggacggccgcgccgat
ctgagcgccggcatcgtgcgcgccatcggccacgccgagcggcgcttcaccgaggacaag
ctgcgcatgctgcgcgccgtgcgctttgccgcgcgctttggttacgaattggagccggag
accttcgccgcgctccgccagcttgcgcccggcatcgcgcaggtgagccgcgagcgcgtc
cgtgacgagctgacccgcatgctcactgagggccatgcccgccacgcctttgagctgctc
gatgccagcggcctgctgcgcgaggtgctgccggagattgaccgcctgcatggcgtcgag
cagccgccccagtaccaccccgagggcgacgtctgggttcacaccctgctgctgctggag
aagcttgcgcccggctgcccggccacgctcgcctggggagccttgctgcacgacgtgggc
aagccggcgacctttgagcgcgcgcctgaccgcatccgctttagcggccatgtggaggtg
ggagtcaaaatcgcggccgaaatctgccgccgcctgcgcttctcgaacgacgagaccgag
cagattctcgccctcgtggagaatcacatgcgctttggcgacatccagcgcatgaagccc
tccacgctcaagcgcttcttccgtctgcccggctttgacgagcatctggagctgcatcgc
atcgactgcctctcgagccacggcgatctcacgctgtatgagtttgcgcagcagcagtac
cacgcgctgccgcccgaggctgttcggccgccgctgctggtcacgggtcgcgacctcatc
gaggctggctaccagcccggcccgcaatttcgccagtggctggccctcgccgaggatgcg
cagcttgagggccgcattcattcgcgcgaagaggggctggcgctcattcgggaagctgcc
gctctctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (41)   

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