KEGG   Anoxybacillus caldiproteolyticus: ISX45_12015
Entry
ISX45_12015       CDS       T06899                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
acai  Anoxybacillus caldiproteolyticus
Pathway
acai03030  DNA replication
acai03430  Mismatch repair
acai03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:acai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ISX45_12015
   03430 Mismatch repair
    ISX45_12015
   03440 Homologous recombination
    ISX45_12015
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acai03032]
    ISX45_12015
   03400 DNA repair and recombination proteins [BR:acai03400]
    ISX45_12015
Enzymes [BR:acai01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ISX45_12015
DNA replication proteins [BR:acai03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ISX45_12015
DNA repair and recombination proteins [BR:acai03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ISX45_12015
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DNA_pol_IIIA_C HROB DUF655 tRNA_anti_2
Other DBs
NCBI-ProteinID: QPA30352
Position
complement(2401208..2404540)
AA seq 1110 aa
MSFVHLHVRSGYSLLNSTAKIPDLVKRASELGFQALALTDEDVLYGAIPFYQECKKYGIN
PIIGMIARIQMEEETYPLVLLAKNEIGYRHLLKISSTIQTKTVNGIPEKWLERYHDGIIA
LTPGKDGYIERLLRRHQKKKALEIVMRYKRIFGDDAFYIAIQRHGLQEDGEWQGELIRLS
EETNTPLVATNDVHYIEKEDAFVHDCLLAMKQGVKLQDEGRRRLPNSEYYLKSTNEMIEL
FSDIPEAIENTVKIARQCHVDIELGNRMLPKYPVPTNQSADGYLRDLCFQGLHERVLSPS
SEYIARLNYELEIIQQMKFSDYFLIVWDFMKFARKRGILTGPGRGSAAGSLVAYVLYITN
VDPLEHGLLFERFLNPERVSMPDIDIDFPDERRDEVIQYVANKYGKQHVAQIITFGTFGA
RAALRDVGRVMGATTAEIDQLVRQIPAKLGVTLQEAYEQSLSFRQAVSSSPTMQEWFETA
LKLEGLPRHTSIHAAGVVISEQPLSDIVPLQQGHDDIYVTQYPMDVLEQLGLLKMDFLGL
RTLTFIGNICALIHRHTGSTVDLQTIPFDDAKTYALLSEGDTSGIFQLESEGMKTVLKQL
KPSQFEDIVAVNALYRPGPIDYIPVYIRRKHGHETVTYLHSDLEPILQSTYGVLIYQEQI
MQIAAKIAGFSLGQADLLRRAVGKKKKDILDQEREHFVKGCIENGYGEAVADKVYDLIVR
FANYGFNRSHAVAYSMIAYQLAYLKAHYPLYFYAALLTSVIGDEEKIAAYICEMRQKGIS
LFPPSVNQSNYSFSIEKGGIRYSLASIKHIGTAAVKAIVQERKKRPFTDFFDFCTRLWGK
AINRKTIESFILAGCFDEFGVERASLLASIDIALEHAELMGPYTDADSDLFANEWSFKPK
YVETSPLSVDEKLSHEKELLGVYVSPHPVTLYRQRIQAVGTRPIAHVGKGRVEQAVRVGA
YLLRERKTRTKKGEEMAFLTISDESGEMEAVAFPDVYRRYFSFLQKNSVVVLEGKVDVRR
TKVQLVIKKVIPIDKLHALYVKICPDHMATGKLSKLKNILQKHRGEVPVFLYYEKERKTV
KLSEEYGVDATAECVTELKELLGNEYVVLK
NT seq 3333 nt   +upstreamnt  +downstreamnt
ttgtcgtttgttcaccttcatgttcggagcggttatagtttgctaaatagtacggctaaa
attcccgatttagtgaaaagagcgagcgaattaggatttcaggcactcgccttaaccgat
gaagatgtgttatatggagccattcccttttatcaagaatgtaaaaaatacggaataaat
ccgattattggtatgatcgcgcgtatacagatggaagaagagacatatccgcttgtgcta
ttagcgaaaaacgaaattggctatcgtcatttactcaaaatcagtagtacgattcaaaca
aaaacagtgaacggaatccccgaaaaatggctggagcgttatcatgatgggataatcgcg
ctcactcccggaaaagacggttatattgaaagattgctgcgtcgccatcagaagaagaag
gcgcttgagatcgtgatgcgatataagcgtatatttggtgatgatgctttttacatagcg
attcagcgccacggattacaagaggatggtgaatggcaaggcgaactcatccgtctgagt
gaagaaacgaatacgccgcttgtcgccacgaacgatgttcattatatcgaaaaagaagat
gccttcgttcatgattgcttacttgcgatgaaacaaggggtaaaacttcaagacgaagga
aggagacgattaccgaatagcgaatactatttaaaatcaactaatgaaatgatcgagctg
ttttctgatataccagaggcgattgaaaatactgtaaaaatcgcacgacaatgccatgtc
gatattgaactgggaaatcgcatgctgccaaaatatccggtaccgacaaatcaatcagct
gatggctatttgcgcgatctttgttttcaaggactgcatgaacgtgttttgtccccttct
tcggagtatatagcgcgcttgaactatgagttggagattattcagcaaatgaagtttagc
gactattttttaatcgtttgggattttatgaagtttgcaaggaagcgaggaattttgacg
ggacctgggcgcggatcggcggcaggctctctagtggcatacgttctttatattacaaac
gtggaccctctcgaacacggcttattgtttgaacgatttttaaatccggagcgcgtgtca
atgcccgatattgatattgattttccggatgaacgccgcgatgaagtcattcaatatgtg
gccaataagtatggaaaacaacatgtcgcgcaaattattacgtttggtacattcggagca
agagcggcacttcgcgatgtcggaagggtcatgggggcaacgacagcagaaatcgatcag
ctggtaaggcaaattcccgctaaattaggcgtgacccttcaagaagcatacgagcaatcg
ctgtcttttcggcaagcggtgagttcgtcaccaacaatgcaagaatggtttgaaaccgct
ttgaaattagaaggtctaccgcgccatacatcgatccatgcggcaggagttgtcatcagt
gaacagccgctttccgacatcgtgccgctgcagcaagggcatgacgacatctatgtcacg
caatatccgatggatgtgttagaacaactaggattattaaaaatggattttctcggattg
cgtacactaacatttatcgggaatatatgtgctctcattcatcgccatacaggaagcacg
gtcgacttacaaaccattccgtttgatgatgctaaaacgtacgcgctattaagtgaagga
gatacaagcgggatttttcagctcgaatcagaggggatgaaaaccgttttaaaacagcta
aagccgtctcaatttgaagacattgtcgctgtcaatgctttataccgtccgggaccaatt
gattatattcccgtatatattaggcggaaacatgggcatgaaaccgttacctaccttcac
tctgacttggaaccgatattacagtccacatacggtgtattaatttatcaggaacaaatt
atgcaaattgctgcaaaaatcgcgggtttctcgctcggacaagcggatttgcttcgccga
gccgtgggcaagaagaaaaaagacattcttgaccaagaaagagagcactttgtgaaagga
tgtatcgaaaacggatatggcgaagcggtagccgataaagtatacgacttaattgtacga
tttgccaactacggttttaaccgaagccatgccgttgcttatagcatgattgcctatcag
ctcgcttatttaaaagcacattatccgttatacttttatgcagcgttattgacaagcgtc
attggtgatgaggaaaaaatcgctgcttatatttgcgaaatgagacaaaaagggatatca
ttgtttccaccttctgtaaatcaaagtaattactccttttccatagaaaaagggggaatt
cgctatagccttgcttccattaaacatatcggcacggcagcggtaaaagcaattgtgcaa
gaacggaaaaaacggccgtttaccgatttctttgatttttgtacccgtctatggggaaaa
gcgatcaatcggaaaacgatagaatcttttattttagccggatgtttcgatgaatttggc
gttgagcgtgcttctttactagcgagtatagatattgcgcttgaacatgcagaattaatg
ggaccgtatacggatgcagatagcgatttatttgcgaacgaatggtcgtttaaaccaaaa
tatgtggaaacgtcccctctttctgttgatgaaaagctatcacatgaaaaggagttgctc
ggtgtttatgtctcccctcacccggtaacgttatatagacagcgcattcaagcagtcggg
acgcggccgatcgctcatgtaggaaaaggaagagttgagcaggctgttcgcgtcggtgct
tatcttttacgcgagcggaaaacacggacgaaaaagggagaagaaatggcatttttgacc
attagcgatgaaagtggtgagatggaagctgtcgcctttcctgatgtgtatcgtcgctat
ttttcttttctacaaaaaaacagcgtagtagtgttagaaggaaaagtagatgttcgcaga
accaaagtgcaattggttattaaaaaggttatcccaatcgacaagctacacgcactttat
gtgaaaatttgtccagatcatatggcaacagggaagttatcgaaactaaaaaacatttta
caaaaacatcgaggagaggtccctgtattcctttattacgaaaaagaacggaaaaccgta
aaactttcagaggaatacggagtcgatgctactgctgaatgtgtaaccgagctgaaagaa
ctactaggcaacgaatatgttgtactaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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