KEGG   Acanthamoeba castellanii: ACA1_071690
Entry
ACA1_071690       CDS       T02667                                 
Name
(RefSeq) vacuolar protein sorting factor 4, putative
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
acan  Acanthamoeba castellanii
Pathway
acan03250  Viral life cycle - HIV-1
acan04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:acan00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    ACA1_071690
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    ACA1_071690
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:acan04131]
    ACA1_071690
   03400 DNA repair and recombination proteins [BR:acan03400]
    ACA1_071690
Membrane trafficking [BR:acan04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    ACA1_071690
DNA repair and recombination proteins [BR:acan03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    ACA1_071690
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_16 RuvB_N AAA_5 AAA_22 AAA_14 IstB_IS21 DUF815 AAA_18 RNA_helicase TIP49 AAA_25 AAA_24 AAA_2 nSTAND3 AAA_33 AAA_17 NACHT Parvo_NS1 AAA_28 PhoH Mg_chelatase AAA_7 Bac_DnaA DUF5906 ATPase_2 bpMoxR Viral_helicase1 TPR_2 BRO1 Cytidylate_kin Sigma54_activat
Other DBs
NCBI-GeneID: 14924528
NCBI-ProteinID: XP_004353075
UniProt: L8HE96
Position
Unknown
AA seq 415 aa
MGDNLLQKAITIVTQATEADNRKEYAEALRLYQLALEYFMTALKYEKNERSKQVIRAKLK
DYIDRAEKLKAYLKGNEGKKPVAQGGGGGEDDEDGDPEKTKLHKALQGAILTEKPNVRWD
DVAGLYAAKESLKEAVILPIKFPQLFRGKRKPWKGILLYGPPGTGKSYLAKAVATEANST
FFSVSSADLVSKWLGESERLVRSLFDMARQNKPSIIFIDELDSLCSSRSDNESEAARRIK
TEFLVQMNGVGNDEDGVLVLGATNIPWQLDAAIRRRFEKRIYISLPDAPTRARIFQIHLG
NTPSNLTAQDYRMLGEMTEGYCYPVRAVQMATHFKPVYEVDHNNPAVSREYLTPCSGSDP
LAREMTWVDVPGEMLMEPRVTMNDFLKSVKNSKPTVNTAELQKQIKFTEEFGQEG
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgggtgacaatctgctgcagaaggcgatcaccatcgtcacgcaagcaaccgaggccgat
aatcgaaaggaatatgctgaggccttgcgtctctaccagcttgctctggagtacttcatg
actgccctcaaatatgaaaagaatgagcgaagcaagcaggtcattcgcgccaagctcaag
gactacattgacagagccgagaagctcaaggcttacctcaagggcaacgagggcaagaag
ccagtggcgcaagggggcgggggaggcgaggatgatgaagacggcgatccagagaagaca
aagctgcacaaggctctgcaaggtgccatcttgaccgagaagcccaacgtgcgctgggac
gacgttgccggcctgtacgctgccaaggaatccctcaaggaggcggtcatcttgccgatc
aagtttcctcagctcttccgaggcaagaggaagccctggaagggcattcttctctatggc
cccccgggtaccggtaagtcctacctggccaaggccgttgcgacggaagcgaactcgacc
ttcttttccgtcagttccgccgatctggtgtccaagtggctcggcgagagcgaaaggctc
gtgcggagcctgttcgacatggcccgccagaacaagccctcgatcattttcatcgacgag
ctcgactcgctgtgcagctccaggagcgataacgaaagcgaagctgcgcgaaggatcaag
accgagttcctcgtccagatgaacggcgtgggcaatgacgaagacggtgtgctcgtgctc
ggcgctaccaacatcccgtggcagcttgacgcggccatcaggagaaggtttgagaagagg
atctacatcagtctgcccgacgcgcccactcgcgcgcgcatcttccagatccacttgggc
aacacaccaagcaatctcacagcgcaagattacagaatgctgggcgagatgaccgaggga
tattgctacccggtgcgggccgtccagatggccacgcacttcaagcccgtgtacgaggtc
gaccacaacaaccctgccgtgtctcgcgagtacctcacgccctgcagcggctcagaccca
ctggcgagagagatgacgtgggtggacgttcctggcgagatgctgatggagccccgagtc
accatgaacgacttcctcaagtcggtcaagaacagcaaaccgaccgtcaacacggccgag
ctgcagaagcaaatcaagttcacggaggagtttggccaggagggctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (34)   
   Pfam (34)   
All databases (76)   

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