KEGG   Acanthamoeba castellanii: ACA1_075290
Entry
ACA1_075290       CDS       T02667                                 
Name
(RefSeq) rRNA pseudouridine synthase, putative
  KO
K11131  H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
acan  Acanthamoeba castellanii
Pathway
acan03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:acan00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    ACA1_075290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:acan03009]
    ACA1_075290
   03032 DNA replication proteins [BR:acan03032]
    ACA1_075290
Ribosome biogenesis [BR:acan03009]
 Eukaryotic type
  Sno RNPs
   Box H/ACA snoRNPs
    ACA1_075290
 Prokaryotic type
    ACA1_075290
DNA replication proteins [BR:acan03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (animals)
    Dyskerin complex
     ACA1_075290
SSDB
Motif
Pfam: DKCLD TruB_C_2 PUA TruB_N Pus10_C UPF0113
Other DBs
NCBI-GeneID: 14924949
NCBI-ProteinID: XP_004353478
UniProt: L8HFL4
Position
Unknown
AA seq 523 aa
MHSIFPFSALIWAFVALPSAAHIKKEKKKSKETLGETQAGGDFSISPAAKGAVLDTSKWP
LLLKNYDKLLVRTGHYTPIPTGHSPLKRPLDDYVRYGVINLDKPSNPSSHEVVAWIKRIL
RVEKTGHSGTLDPKVTGCLLVCIQRATRLVKSQQGAGKEYVAVVRLHSAIDEEAKLAKAI
ETLTGALFQRPPLIAAVKRRLRVRTIYQSKLVEFDKERNLGIFWVDCEAGTYIRTLCVHL
GLLLGVGGHMQELRRVRSGLLTENAKDCLVTCHDILDAQYVYDTTKDESYLRRIIQPLEV
LLTKHKRVVVKDSAVNAICYGAKFMIPGLLRYEEGIEVGEEIVMMTTKGEAIALGIAQMS
TADMASCDHGVVAKIKRVILERDTYPRRWGKGPRAQLKKQLIKDGKLDKFGRPNDNTPSE
WKNTYVDYNVPKGEALPAPVKSTPTTPMKIDVTIKEEPKADKEEKKESKKRKKEESSDDS
DSDSDSDSSSSEEEKKKKKKKAKKAKKDETPSKKDKKKKKKSA
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgcactccatttttccattctccgcgctaatctgggcatttgtcgctctgccatctgca
gcgcacattaagaaggagaagaagaagtccaaggagaccctcggagagacccaggccgga
ggcgatttctccatttcgcccgccgctaaaggtgccgtccttgatacctccaaatggcca
ctcctcttgaagaactacgacaagctccttgtccgcaccggacactacacccccatcccc
accggtcactcgccgcttaagcgcccgctcgatgactacgtccgttatggtgtgatcaac
ctcgacaagccctccaacccctcctcgcacgaggttgtggcctggatcaagaggatcctc
cgcgtcgagaagaccggtcacagcggcacccttgaccccaaggtcaccggttgcttgctt
gtgtgcatccagagggctactcgcctggtcaagtcccagcagggtgccggtaaggagtac
gtcgccgtcgtccgcctgcacagcgccatcgacgaggaggccaagctggccaaggccatc
gaaactttgaccggtgcgctgttccagcgtcccccgctgatcgccgccgtgaagaggagg
ctgcgcgtgcgtaccatctaccagagcaagctcgtcgagttcgacaaggagaggaacctc
ggtatcttctgggtcgactgcgaggccggaacctacatccgtaccctctgcgtccacttg
ggtcttctcctcggcgtcggcggtcacatgcaggagctcaggcgcgtcaggtccggtctt
ctgactgagaacgccaaggactgcttggtgacttgccatgacatcttggatgcccagtac
gtctacgacaccaccaaggacgagtcctaccttcgtcgcatcatccagcccctcgaggtg
ctccttaccaagcacaagcgcgtggtcgtcaaggactctgccgtcaacgccatctgctac
ggtgccaagttcatgatccctggtctgctccgctatgaggagggcattgaggtcggcgag
gagatcgtgatgatgaccaccaagggtgaggccatcgcgctcggcattgcgcagatgtcc
accgccgacatggcctcgtgcgaccacggcgtcgtcgccaagatcaagagggtgatcctc
gagagggacacctacccccgcaggtggggcaagggacccagggctcagctgaagaagcag
ctgatcaaggacggcaagctcgacaagttcggccgccccaacgacaacacgcccagcgag
tggaagaacacctacgttgactacaacgtgcccaagggtgaggccctgcccgcgccggtc
aagtcgacgcccaccaccccgatgaagatcgacgtcaccatcaaggaggagcccaaggcc
gacaaggaggagaagaaggagagcaagaagaggaagaaggaggagtcgtcggacgattcc
gactcggactcggattccgattcctcttcgtccgaggaggaaaagaagaagaagaagaag
aaggccaagaaggccaagaaggacgagacgccctcgaagaaggacaagaagaagaagaag
aagtccgcctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (55)   
   KEGG ORTHOLOGY (1)   
   RefGene (51)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (69)   

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