KEGG   Acanthamoeba castellanii: ACA1_225900
Entry
ACA1_225900       CDS       T02667                                 
Name
(RefSeq) transcription factor tfb2 subfamily protein
  KO
K03144  transcription initiation factor TFIIH subunit 4
Organism
acan  Acanthamoeba castellanii
Pathway
acan03022  Basal transcription factors
acan03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:acan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    ACA1_225900
  09124 Replication and repair
   03420 Nucleotide excision repair
    ACA1_225900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acan03021]
    ACA1_225900
   03400 DNA repair and recombination proteins [BR:acan03400]
    ACA1_225900
Transcription machinery [BR:acan03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     ACA1_225900
DNA repair and recombination proteins [BR:acan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     ACA1_225900
SSDB
Motif
Pfam: Tfb2 Tfb2_C SinI
Other DBs
NCBI-GeneID: 14922422
NCBI-ProteinID: XP_004346470
UniProt: L8H8M7
Position
Unknown
AA seq 465 aa
MGEVEAYLTALPQAALDNLYADPWTCQAVFRSLPALAKQWVLRLAFASPSITRSRLLQHW
TSPRFQSQGEAALRRLLALRILRERLPADRRDHGGGDEADVMEVMEPLGGGVAYEFNKHF
GSNFQKMDGEGEEEEEAMPTREELAAFTTSCWDTIFLFIMGSTVIQPPSDRVVSLLTRGE
FMVVHEEDQSIRIADKGFPFLLKDLRTQVWTLLLLYLRSLQEEKANVHDVLSFLFRLSFL
TVGEGYQMDDLAFSESGLLQDLQDLGIIYRKHKDSKWLYPTQLAIGLSSTEAAKRDQEGW
IIVGTDYRIYAYTSSPVKLLLLSLFTQIEYQLPNMVMGILLRENIRQAVQVGISANQILQ
FLETNAHPQMKQNTPIIPESIADQLRLWEAEDRRLSLSSGYFYDDFASLAAFKKAEKYAR
DVGALIYSDATKRFLFVSEPGHQLLRRYVKQHLSSSSSSSTLTSK
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgggcgaggtggaagcatacctgacggcactgccccaggcggctctcgacaacctctat
gccgacccctggacttgccaggccgtttttcggtcgttgccggccctggccaagcagtgg
gtgctacgtttggcgttcgcctcgccgagcatcacgcgctcgcgcctcctccaacactgg
acctctccgcgctttcagtcgcagggcgaagctgccctgcggcgactactcgccctccgc
atcctccgcgagcggctgccggccgaccggcgggaccacggcggcggtgatgaagcagac
gtgatggaggtgatggagccgctcggtggcggcgtcgcgtacgagttcaacaagcacttc
ggcagcaacttccagaagatggacggcgaaggtgaagaggaagaagaggcgatgccgacg
agggaggagctggccgcgttcaccacgtcgtgctgggacaccatcttcctgttcatcatg
ggctccaccgtcatccaaccgccgtccgaccgagtcgtgtctctccttacccgcggggag
ttcatggtggtacacgaggaagaccagtcgattcgcatcgcagacaagggcttcccgttc
ttgctgaaggacctgcgcacgcaggtctggaccctgctgctcctctacctgcggtccctg
caggaggagaaggccaacgtccacgacgttctctccttcctcttccgcctcagctttctc
accgtcggcgagggctaccaaatggacgaccttgcgttctccgagtccgggctgctgcag
gacctgcaggatctgggcatcatctatcgcaagcacaaggactcgaaatggctctacccg
acgcaactggccatcggcctctcgtcaaccgaagcggcgaagcgggaccaagagggttgg
atcatcgtcggcaccgactaccgcatctacgcctacacctccagccccgtgaagctgctc
ctgctgagcctgttcacccagatcgagtaccagctgcccaacatggtcatgggcatcctg
cttcgcgaaaacatccgacaggccgtgcaggtcggcatctccgccaatcagatcctgcag
tttctcgagacgaacgcgcatccacagatgaagcagaacacgcccatcattccagagtcg
atagccgaccagctgcgattatgggaagccgaggaccgacgcctgtccctcagctcgggc
tacttctacgacgatttcgcttcgctggcggcgttcaagaaggcggaaaagtacgcccgg
gacgtgggcgctctcatctactcggacgccaccaagcgattcctgttcgtgagcgagccg
ggacaccaactgctgcgacggtacgtcaagcagcacctctcctcttcctcttcctcatcg
acattgacatccaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (29)   

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