KEGG   Aeromonas caviae: VI35_03370
Entry
VI35_03370        CDS       T05190                                 
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
acav  Aeromonas caviae
Brite
KEGG Orthology (KO) [BR:acav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:acav03016]
    VI35_03370
Enzymes [BR:acav01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     VI35_03370
Transfer RNA biogenesis [BR:acav03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    VI35_03370
 Prokaryotic type
    VI35_03370
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: ATP92265
Position
704344..705402
AA seq 352 aa
MLEQLAYLHGTPTARGILKAEAADFVVNEDLGFEPCGEGEHIFVRVRKTGENTAWVAGLL
ADAAGVARNAVTWAGLKDRHAVTEQWFGIHLPGKGEPDLSVIENDNIRILEVKRHNKKLR
VGYLKGNHFTLRLTGLEQADGLESRLQAIATQGVPNYYGEQRFGRGGNNLEAAKAMFAGK
RIKDRNKRSLYLSAARSMLFNAIVSARIEQGLAHQLLAGDCVMLKGSHSIFSEESVTPEL
EARLASGDVQLTAPQWGRGRLASQGAAAEFEQGVLAPYGDWCEGLEKAGLDQDRRPLLLK
PEQMSWQREDEVLTLSFFLPAGAFATSVVRELMQAEEADHGFRNPTDANSGQ
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgcttgaacaacttgcctatctgcacgggacgcccactgctcgcggcatcctcaaggcc
gaggccgccgacttcgtggtcaatgaagatctcgggttcgaaccttgcggcgagggtgaa
cacatcttcgtccgggtacgcaaaaccggcgagaatactgcctgggtggctggcctgctg
gccgatgcggccggggttgcccgcaatgcagtgacctgggctggtctgaaagatcgccat
gcggtgaccgaacagtggttcggcatccatctgccgggcaagggcgagccggatctctcg
gtcatcgagaacgacaacatccggatccttgaggtgaagcgccacaacaagaagctgcgg
gtcggctatctcaagggcaaccacttcaccctgcgtctcaccgggctggagcaggccgac
gggctggaatcccgtttgcaggcgatagcaacccagggggtgcccaactactacggcgag
cagcgtttcggccgaggtggcaacaacctggaggccgccaaggcgatgttcgccggcaaa
cggatcaaggatcgcaacaagcgctccctctatctgtccgccgcccgcagcatgctgttc
aatgccatcgtcagcgcccgcatcgagcagggactggcccatcagctgctggcaggcgac
tgcgtgatgctcaagggcagccactccatcttcagcgaagagagcgtgactcccgagttg
gaggcacgccttgcctccggagacgtgcagctgaccgctccccagtggggccgtggccgt
ctggcgagccagggcgctgctgccgagttcgagcaaggagtgctggccccttatggtgac
tggtgcgaaggactggagaaagccgggctggatcaggacaggcgcccgctgctgctcaag
ccggagcagatgagctggcaacgggaggacgaggtgctgaccctgtcgttcttcctgccg
gccggcgcctttgccaccagcgtggtacgcgagttaatgcaggccgaagaggccgatcac
ggtttcaggaacccaaccgatgcgaattctggtcagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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