KEGG   Acinetobacter pittii: BDGL_003350
Entry
BDGL_003350       CDS       T01684                                 
Symbol
topA
Name
(RefSeq) DNA topoisomerase type I, omega protein
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
acc  Acinetobacter pittii
Brite
KEGG Orthology (KO) [BR:acc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acc03032]
    BDGL_003350 (topA)
   03400 DNA repair and recombination proteins [BR:acc03400]
    BDGL_003350 (topA)
Enzymes [BR:acc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     BDGL_003350 (topA)
DNA replication proteins [BR:acc03032]
 Prokaryotic type
  DNA Topoisomerases
   BDGL_003350 (topA)
DNA repair and recombination proteins [BR:acc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BDGL_003350 (topA)
SSDB
Motif
Pfam: Topoisom_bac Topo_Zn_Ribbon TOP1_ZnF Toprim zf-C4_Topoisom Zn_ribbon_recom Toprim_C_rpt
Other DBs
NCBI-GeneID: 11638019
NCBI-ProteinID: YP_004997618
UniProt: F0KM24
Position
3599757..3602393
AA seq 878 aa
MANTSRSASQSTASTAPAAHKRALVIVESPAKAKTINKYLGSQYIVKSSVGHVRDLPTGG
SKSTEKKLAARTKLTEAEKEQKASQALVNRMGVDPEHGWEAHYEVLPGKENVVAELKKLA
KDADAIYLATDLDREGEAIAWHLREVIGGDDSRYHRVVFNEITKNAIQEAFKQPTRLDLN
RVNAQQARRFLDRVVGFMVSPLLWEKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYW
QVFADTQAKKDDIRLEAVKQAGKTLKLKNKAETDALLDVLKGAEYKVAQREDKPTKVNPS
APYITSTLQQAASTRLGFSVKKTMMLAQRLYEAGFITYMRTDSTFLSDDAVSMVRAHIEN
QFGEKYLPAKPNRYGNKAGAQEAHEAIRPSNVALTGDQLAGVERDAQRLYDLIWRQFVAC
QMTPAEYLSSTLTVEAANVELKAKGRTLVFDGFTRVRGANKSDDDIILPAIKVGEILKLE
KLDPSQHFTKPPARFTEASLVKELEKRSIGRPSTYAAIISTIQERGYVKLENRRLFAEKM
GEIVTDRLDESFNNLMNYAFTADLEGQLDKVATGERNWKELLDTFYGDFKKRLTNAQGEH
GMRRNQPVEVPAVHCPECSRPMQIRTGTTGVFLGCSGYNLPPKERCKGTLNLTPVESLAA
LSDDDGAETADLMSKHRCAKCGTAMDSYVIDGGRKLHVCGNNPDCNGFELEEGEFKIKGY
DGPTIPCDKCDGEMQLKTGRFGPYFACTSCDNTRKVLKSGQPAPPRVEPIKMEHLRSTKH
DDYFVLRDGAAGLFLAASKFPKIRETRAPKVAELRSVAAQLDPKYQFILQAPDVDPEGNP
TVVKFSRKNQSQYVGSETPEGKQTKWSLIYQNGKWVEG
NT seq 2637 nt   +upstreamnt  +downstreamnt
atggcgaatacctcgcgctctgcatctcaaagcacagcatctactgcacctgctgcacat
aaacgtgccttagtgattgtggagtcgcctgccaaagcgaaaaccatcaataaatatctg
ggttcgcaatacattgtaaagtcttctgtaggtcacgtgcgtgatttgccaacaggtggc
agtaaatcaactgagaaaaagctggctgcccggacgaaactcactgaagcagaaaaagaa
caaaaagccagtcaggctttagttaatcgtatgggggttgatcctgaacatggttgggaa
gctcattacgaagttctgccaggtaaggaaaatgttgttgctgaactaaagaaacttgcc
aaagatgctgatgcaatctatctcgcaacggacttggatagagaaggggaagccattgct
tggcacctaagagaagttattggtggtgacgacagccgttatcatcgcgtggtatttaac
gaaattactaaaaatgccattcaagaagcatttaaacaacctacgcgcctagatttaaac
cgagttaatgctcagcaagcacgccgtttcttagaccgtgttgttggctttatggtttca
ccattactttgggaaaagattgcccgtggtttatcggcaggtcgtgtacagtctgtagcg
gtgaagctggttgtagagcgtgaaagagaaattcgtgcttttattccggaagaatactgg
caagtttttgcagacacgcaagccaagaaagatgacattcgtcttgaagcagttaagcaa
gctggtaaaacccttaaactgaaaaataaagctgaaactgatgctttattggatgtttta
aaaggtgctgaatataaagttgcacagcgtgaagataaaccgactaaggtaaatccaagt
gcaccgtatatcacttcaacgctgcaacaagctgcaagtacacgtttaggtttttctgta
aagaaaaccatgatgctggcacagcgtctatatgaagcaggttttattacctatatgcgt
actgactcaacgttcttgagtgatgatgcagtaagcatggtacgtgctcatattgaaaac
caatttggtgagaaatatttaccggcgaagccaaaccgctatgggaacaaagcgggtgct
caagaagcccatgaagcgattcgtccttcaaatgttgcacttacaggtgatcaacttgcg
ggtgtagagcgtgatgctcagcgtttatatgatttgatctggcgtcagtttgttgcatgt
caaatgactccagcagaatatttatcttcaactttaacggttgaagctgcaaatgttgaa
ttgaaggcaaaaggccgtacgcttgtatttgatggttttacacgagtgcgtggtgctaac
aagtctgatgacgatattattttgcctgcaattaaagtaggtgaaattttaaaattagag
aagttagacccaagtcagcactttactaaaccacctgcacgttttactgaagcttcttta
gttaaagaactcgaaaaacgtagtattggtcgtccttcgacttatgcagcgattatttct
acaattcaagaacgtggctacgttaagttggaaaaccgtcgtcttttcgccgaaaaaatg
ggtgaaatcgtgacagatcgacttgatgaaagtttcaataacttgatgaactatgccttt
acagcagaccttgaagggcagctcgataaagttgcaacaggcgagcgtaactggaaagag
ttacttgatactttctatggtgacttcaagaaacgtcttaccaatgctcaaggcgagcac
ggcatgcgccgcaaccagccggttgaagtgccagcggtacattgtcctgaatgttcacgt
ccaatgcagattcgtacaggtacaacaggcgtattcttaggttgttctggctacaactta
ccgcctaaagagcgttgtaaaggtactttgaacttaacgcctgttgagtccttagctgct
ctttctgatgatgatggtgctgaaaccgcagatttgatgtcaaaacatcgttgtgcaaaa
tgtggcacagccatggatagctacgtgattgatggtggtcgtaaactgcatgtatgtggt
aacaaccctgactgtaacggttttgagcttgaagaaggcgagttcaagattaaaggctac
gatggcccaaccattccgtgtgataaatgtgatggtgaaatgcagcttaaaactggccgt
tttggtccgtatttcgcttgtacaagctgtgacaatactcgtaaagtcttgaaaagtggt
cagcctgcacctccacgtgtagaaccgatcaagatggaacatttgcgctcaacaaagcat
gatgactatttcgtgttgcgtgatggtgctgctggtttattcttggctgcaagtaaattc
ccgaaaattcgtgaaacacgtgcgccaaaagttgcggaattgcgtagtgttgccgctcag
cttgatcctaaatatcaatttattttacaagcaccagacgtagaccctgaaggtaatccg
acagttgtgaaattcagtcgtaagaatcaatcacaatatgtaggctcggaaactccagaa
ggtaaacaaaccaaatggagcctaatttatcaaaatggtaaatgggttgagggctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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