KEGG   Acinetobacter oleivorans: AOLE_16435
Entry
AOLE_16435        CDS       T01263                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
acd  Acinetobacter oleivorans
Pathway
acd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:acd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AOLE_16435 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acd03021]
    AOLE_16435 (rho)
   03019 Messenger RNA biogenesis [BR:acd03019]
    AOLE_16435 (rho)
Transcription machinery [BR:acd03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     AOLE_16435 (rho)
Messenger RNA biogenesis [BR:acd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     AOLE_16435 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT Sulfotransfer_1 AAA_22 AAA_25 OB_RNB AAA Spore_III_AA GpA_ATPase
Other DBs
NCBI-ProteinID: ADI92174
UniProt: D8JG56
Position
3502012..3503280
AA seq 422 aa
MNLTELKKKPIGELIKIAEFMGLEGMARNRKQDIIFAILKRHAMNGEEIFGDGVLEILSD
GFGFLRSAAGSYLAGPDDIYVSPSQIRRFNLRTGDTITGTIRPPKEGERYFALLKVNQIN
YDTPENSRNKILFENLTPLFPTEQLVMELGNGTTEDLTARVVDLVAPIGKGQRSIIVAPP
KAGKTMLLQNIAQSIVRNNPEVFLIVLLIDERPEEVTEMERTVRGEVIASTFDEAPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALERPKRF
FGAARNIEEGGSLTIISTALIETGSKMDDVIYEEFKGTGNQEITLDRRIAEKRVFPAMNI
KKSGTRREERLMDDDNLRKVWILRKLLHPMDELAAMEFLLDRMKETKTNDDFFDQMKRKA
ST
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaatttaactgaactcaagaaaaaaccaattggtgaattaattaaaattgctgaattt
atgggcctggaaggtatggctcgtaaccgaaagcaagatattatctttgccattttgaaa
cgccatgcaatgaatggcgaagaaatttttggtgatggcgttcttgaaattctctctgat
ggttttggttttttgcgctctgccgcaggttcgtatttagcaggtccggatgatatttat
gtgagtccttcacaaatccgacgctttaacttgcgtacaggtgataccatcacaggtact
attcgccctccaaaagaaggtgagcgttattttgcgttgctcaaagttaaccagattaac
tatgacacgccggaaaattctcgaaataaaattttatttgaaaacttaacacctcttttc
ccaactgaacaattggttatggaactcggtaatggtacgacagaagatttaactgctcgt
gttgttgacttagttgcgccaattggtaaaggacaacgttctattattgttgcaccgcca
aaagcgggtaaaacaatgttactccaaaatattgctcaatcgattgttagaaacaatcct
gaagtattcttgattgttctattaattgacgagcgtccagaagaagtaactgaaatggaa
cgtactgttcgcggtgaagtcattgcttcaacattcgacgaagctcctgctcgccacgta
caagttgcagaaatggtaattgaaaaagcaaaacgtcttgttgaacataaaaaagacgtt
gtgattcttcttgactctattacccgtcttgcacgtgcttacaacaccgttatcccatca
tcaggtaaagtattaactggtggtgtagatgctcatgcattagagcgccctaaacgtttc
ttcggtgctgcacgtaatattgaagaaggcggatctcttacgatcatttcaactgctttg
attgaaacaggcagtaaaatggatgacgtaatttatgaagaattcaaaggtacaggtaac
caagagattacacttgatcgccgtattgctgaaaaacgcgtcttccctgccatgaatatt
aagaaatctggtactcgtcgtgaagagcgtttaatggatgatgataacttacgtaaagta
tggatcctccgtaagcttctacatcctatggatgaattagcggcaatggaattcttactt
gatcgtatgaaagaaaccaaaacaaatgatgatttcttcgatcaaatgaagcgtaaagct
tcaacttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (20)   

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