KEGG   Acidothermus cellulolyticus: Acel_0299
Entry
Acel_0299         CDS       T00426                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
ace  Acidothermus cellulolyticus
Pathway
ace03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ace00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Acel_0299
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ace03021]
    Acel_0299
   03400 DNA repair and recombination proteins [BR:ace03400]
    Acel_0299
Enzymes [BR:ace01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Acel_0299
Transcription machinery [BR:ace03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Acel_0299
DNA repair and recombination proteins [BR:ace03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Acel_0299
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_45 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 Peptidase_M23 RnfC_N
Other DBs
NCBI-ProteinID: ABK52073
UniProt: A0LRL3
Position
317496..321005
AA seq 1169 aa
MVDREPWKEPHLAASGSTSMINGPLAPHRVSFAKIHEPLDLPNLLALQIESFDWLVGNDA
WKARVEAALAAGRTDVNTSSGLEEIFEEISPIEDISGTMSLSFRDHRFEPPKNTPDECRE
RDFTYSAPLFVTAEFVNNTTGEIKSQTVFMGDFPLMTEKGTFIINGTERVVVSQLVRSPG
VYFDRTVDKTSDRDIYGCKIIPSRGAWLELEIDKRDNVGVRIDRKRKQSVTVLLKALGWD
DARILERFGEFEAIRATLEKDHVHTQEEALLDIYRKLRPGEPPTYEAAQTLLNNLYFNPK
RYDLAKVGRYKVNKKLGLDLPYTQNTLTEEDIVATIDYLVRLHAGQTETTRNGRTVIIET
DDIDHFGNRRLRTVGELIQNQIRLGLARMERVVRERMTTQDIVAITPQTLINIRPVVASI
KEFFGTSQLSQFMDQTNPLAGLTHKRRLNALGPGGLSRERAGFEVRDVHPSHYGRMCPIE
TPEGPNIGLIGSLATHGRVNAFGFVETPYRKVINGRVTDQVDYLTADEEDRHVIAQANAP
LNEDGSFAEERVLVRRRGGEVDYVHPSTVDYMDVSPRQMVSVATALIPFLEHDDANRALM
GSNMQRQAVPLLRAEAPLVGTGMEFRAAVDAGDVVIASKAGVVEEVSADAITIAADDGTR
QTYRLAKFRRSNQGTCINQKPIVDEGQRVEAGQPIADGPCTQGGELALGRNLLVAFMSWE
GHNYEDAIIISERLVKEDILSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEILADLDER
GIIRIGADVVPGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGKV
IDVKVFTRDDAELPPGVNELVRVYVAQKRKITDGDKLAGRHGNKGVIAKILPEEDMPFLE
DGTPVDIILNPLGVPGRMNVGQVLETHLGWAAKSGWKVELNGQPEGWRKRLADIGALDAP
PNTLVATPVFDGAKEDEIRGLLENALPNSDGLRMVGPDGKARLFDGRTGEPYPEPISVGY
IYIMKLHHLVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQE
LLTIKSDDVLGRVKVYEAIVKGENIPEPGIPESFKVLVKEMQALCLNVEVLSSDGMTVEM
RETDDEVFRAAEELGIDLSRREPSSVEEI
NT seq 3510 nt   +upstreamnt  +downstreamnt
atggtagatcgcgagccctggaaggaacctcacttggccgcctcgggcagtacatcgatg
atcaacggacctctagctccccaccgcgtctcattcgccaaaatccacgaaccgctcgac
ctccccaacctcctcgccctgcagatcgagtcctttgactggctcgtcggcaacgacgcg
tggaaggcgcgggtcgaggcggcgcttgccgccggccggaccgacgtcaacacctcgtcg
ggactcgaggagatcttcgaggagatcagcccgatcgaagacatctccggcacgatgtcc
ctgtcgttccgcgaccaccgcttcgagccgcccaagaacacccccgacgagtgccgggag
cgcgacttcacctactcggcgccgctcttcgtgaccgcggaattcgtcaacaacacgacc
ggcgagatcaagagccagaccgtgttcatgggcgatttcccgctgatgaccgagaagggc
acgttcatcatcaacggcaccgagcgggtcgtcgtctcgcagctggtccgatccccgggc
gtgtacttcgatcgcaccgtcgacaagacctccgaccgtgacatttacggatgcaagatc
attccgagccggggtgcgtggctcgagctcgagatcgacaagcgggacaatgtcggcgtc
cgcatcgaccggaagcgcaagcagagcgtgacggtcctgctgaaggcgctcggttgggac
gacgcccgcatcctggagcggttcggggagttcgaggcgatccgggccaccctcgagaag
gaccatgtgcacacccaggaggaggccctcctcgacatctaccgcaagcttcgtcccggc
gaaccaccgacgtacgaggcggcgcagaccctgctgaacaacctgtacttcaaccccaag
cggtacgaccttgcgaaggtcggccgatacaaggtcaacaagaagctcggcctggacctg
ccgtacacccagaacaccctcaccgaagaagacatcgtcgccaccatcgattacctcgtg
cggctgcacgccgggcagacggagaccacccggaacggccggacggtgatcatcgaaacg
gacgacatcgaccacttcggcaaccggcggctgcggacggtcggcgagctcatccagaac
cagatccggctggggctggcgcgcatggagcgggtggtccgggagcggatgaccacccag
gacatcgtggccatcaccccccagacgttgatcaacatcaggccggtggtggcgagcatc
aaggagttcttcggcacctcccagctcagccagttcatggaccagaccaacccgctggcc
ggcctcacccacaagcgccggttgaacgcgctcggcccgggtggtctgtcccgggagcgc
gcggggttcgaagtccgtgacgtgcaccccagccactacggccggatgtgcccgatcgag
acaccggaaggtccgaacatcggtctgatcggttcgctcgcaacgcacggccgggtcaac
gcgttcggcttcgtcgagaccccctaccggaaggtgatcaatggccgggtgaccgaccag
gtcgactacctcaccgccgacgaggaagaccggcacgtcatcgcccaggccaacgccccc
ctcaacgaggacggcagcttcgccgaggagcgggtcttggtgcgccgtcgcggcggagag
gtcgactacgtccacccgagcacggtcgactacatggacgtgtcgccgcgacaaatggtc
tcggtggcgaccgcgctcatcccgttcctcgagcacgacgacgcgaaccgggcgctcatg
ggctcgaacatgcagcgccaggcggtaccgctgctgcgcgccgaagcgccgctcgtcggt
acgggcatggagttccgcgcggccgtcgatgccggtgacgtcgtcatcgcgagcaaggcc
ggcgtcgtcgaggaagtctcggctgacgcgatcaccattgcggccgacgacggtacccgg
cagacctaccggctggcgaagttccgccgctccaaccaagggacgtgcatcaaccagaag
ccgatcgtcgacgagggtcagcgggtcgaggccggacagccgatcgcggacggcccctgc
acgcagggcggcgagctggcgctcgggcgtaacctgctcgtcgccttcatgtcctgggaa
ggccacaactacgaagacgccatcatcatctcggagcgtctcgtcaaggaggacatcctc
tcgtcgatccacatcgaagagcacgaggtcgacgcccgggacaccaagctcggcccggaa
gagatcacccgcgacattcccaatgtcagcgaggagatcctcgccgacctggacgagcgc
ggcatcatccgcatcggcgccgacgtcgtccccggtgacatcctcgtcggcaaggtgacg
ccgaagggcgagaccgagctcacccccgaagagcggcttctccgggcgatcttcggggag
aaggcccgtgaggtccgggacacctcgctcaaggttccccacggcgagtccggcaaggtc
atcgatgtcaaggtcttcacgcgggacgacgcggagttgccgcccggcgtcaacgagctc
gtccgggtctacgtcgcccagaagcggaagatcaccgatggggacaagctggccggacgg
cacggcaacaagggcgtcatcgcgaagatcctcccggaggaggacatgccgttcctggag
gacggcactccggtcgacatcatcctcaacccgctcggtgtgcccggccggatgaacgtc
ggtcaggtgctggagacgcacctcggctgggcggccaagtcgggctggaaggtcgagctc
aacggccagcccgagggctggcggaagcggctcgccgacatcggcgccctggacgcaccg
ccgaacacgctcgtcgcgacccccgtcttcgacggcgcgaaagaggacgagattcgcggt
cttctggagaacgccctgcccaacagcgacggcttgcggatggtcggcccggacggcaag
gcgcggctcttcgacggccggaccggcgagccctatccggagccgatcagcgtcggctac
atctacatcatgaagctccaccacctggtggacgacaagctgcacgcccggtcgaccggc
ccctactcgatgatcacccagcagccgttgggtgggaaagcccaattcggtggccagcgg
ttcggcgagatggaggtgtgggcgctcgaggcctatggtgcggcgtacgcgctgcaggag
ctgctcacgatcaaatccgacgacgttctcggccgggtcaaggtctacgaggcgatcgtc
aagggcgagaacatcccggagccgggcatccccgagtcgttcaaggtcctggtcaaggag
atgcaggcgctctgcctcaacgtcgaggtcctctccagcgacgggatgaccgtcgagatg
cgggagacggatgacgaagtcttccgcgccgccgaagagctcggcatcgacctctcgcgc
cgcgaacccagcagcgtcgaggagatctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (50)   
   KEGG ORTHOLOGY (1)   
   RefGene (47)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (8)   
   Pfam (8)   
All databases (67)   

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