KEGG   Acidothermus cellulolyticus: Acel_1109
Entry
Acel_1109         CDS       T00426                                 
Name
(GenBank) Excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
ace  Acidothermus cellulolyticus
Pathway
ace03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ace00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Acel_1109
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ace03400]
    Acel_1109
DNA repair and recombination proteins [BR:ace03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Acel_1109
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Acel_1109
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran AAA_16 SMC_N AAA_21 AAA_29 nSTAND1 RsgA_GTPase APS_kinase AAA_23 AAA_33 AAA_22 DnaJ_CXXCXGXG nSTAND3 NACHT AAA_18 DUF4350 T2SSE Viral_helicase1 cobW SLFN-g3_helicase FtsK_SpoIIIE NTPase_1 Ncstrn_small DUF2116
Other DBs
NCBI-ProteinID: ABK52881
UniProt: A0LTX1
Position
1228829..1231672
AA seq 947 aa
MADRLVIRGAREHNLKDVSLDLPRNALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLYARIGHPH
CPVCGRAISRQTPQQIVDRILEFPAGTRFQVLAPVVRGRKGEYAEMFAELQSKGFVRVRV
DGVVHPLDNPPRLKKQEKHTIDVVVDRLAVKENVAHRLVDSIETALRLSGGLVTLEFVDL
PESDPHRERMFSEHLACPDDDLDFEELEPRSFSFNSPYGACPECTGLGTRLVADPDLIVP
DPSKSIADGAIAPWATGHVSDYFVRLLEALADAAGFSTQTRWDRLPAKARKYILYGYPEP
LYVQYRNRYGRHRSYHTTYEGVVPYIERRHGEVDSDYSRERFESYMREVPCPKCQGKRLK
PLALAVTVGGKSIADVSAMPISECARFLRALDLTARERQIAERVLKEVNTRLGFLLDVGL
DYLTLDRPAATLAGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLLRLR
DLGNTLIVVEHDEDTIRAADWVVDIGPGAGEHGGQIVVSGPVPELLACKESLTGAYLSGR
RTIEVPAIRRPADPKRRLIVKGAREHNLRNIDVAFPLGCFVVVTGVSGSGKSTLVNDILY
AALAKELNGAKTVPGRHDRILGLDLVDKAIHVDQSPIGRTPRSNPATYTGVFDDIRRLFA
ETTEAKVRGYTPGRFSFNVKGGRCEACAGDGTIKIEMNFLPDVYVPCEVCHGARYNRETL
EVHYKGKTIADVLDMPIEEAADFFGPLPGIARRLTTLVEVGLGYVRLGQPAPTLSGGEAQ
RVKLASELQKRATGRTVYILDEPTTGLHFEDVRKLLAVLQSLVERGNTVIVIEHNLDVIK
TADWVIDLGPEGGAAGGQVVAEGPPEQVAATEGSYTGAFLRKVLRLS
NT seq 2844 nt   +upstreamnt  +downstreamnt
atggctgatcggcttgtcatccggggcgctcgcgagcacaacctcaaggacgtctctctc
gatctcccgcggaacgcattgatcgtcttcaccggcctctccggatcgggaaaatcaagc
ctcgcatttgacacgatcttcgcggagggccagcggcggtacgtggagtccctctcggcg
tacgcccggcaatttctcggtcagatggacaagccggacgttgatttcatcgaggggctc
tcgccggcggtgtccatcgaccaaaaatcgacgtcgcgaaatccgcgctccacggtgggt
acgatcaccgaggtttacgactacctgcgtctgctgtacgcgcggatcgggcatccgcac
tgcccggtctgcggacgggcgatttcccgccagacgccgcagcagatcgtcgaccgcatc
ctggaatttcccgccggtacgcgattccaggtgcttgcgccggtcgtccgcggccgcaaa
ggcgagtacgccgagatgttcgccgagctgcagagcaaaggtttcgtgcgggtacgggtc
gacggcgtcgtccacccgctggacaatccgcctcggttgaaaaagcaggagaagcacacc
atcgacgtcgtggtcgaccggcttgccgtcaaggagaacgtcgcccatcggctcgttgac
tcgattgagacggcgctgcggctctccggaggtctggtcacgctcgaattcgtcgatctg
ccggagagcgacccgcaccgggagcgaatgttctccgaacatctcgcctgtcccgacgac
gacctggattttgaagaattggagccgcgttctttctccttcaattcgccgtacggcgcc
tgtccggaatgcaccggcctcggcacccggctcgtcgccgatcccgatctcatcgttccg
gatccgagcaaatccatcgcggacggcgccatcgcgccgtgggcgaccgggcacgtgtcg
gactactttgtccgcctcctcgaggcattggccgacgcggcgggattctccacccagacc
cgctgggaccggctgcccgccaaagcccgcaagtacatcctgtacgggtaccccgaaccg
ttgtacgtccaataccgcaatcggtacggccggcaccggtcataccacacgacctacgaa
ggtgtcgtgccgtacatcgaacgccggcacggcgaagtcgacagcgactacagccgggag
cggttcgagagctacatgcgggaagtgccgtgcccgaagtgccagggcaaacggctcaag
ccgctcgcgctcgccgtgacggtcggcgggaagtccatcgccgacgtgtccgccatgccc
atcagcgaatgtgcgcgattcctgcgcgcccttgacctaaccgcacgggaacggcagatc
gccgagcgcgtgctcaaagaagtgaacacccgcctgggtttcctgctggacgtcggtctc
gactacctcacgcttgaccgtcccgccgctacgttggcgggtggcgaggcgcaacgcatt
cggctggccacccagatcggctccggtcttgtcggcgttctctatgtgctggacgagccg
agtatcggcctgcaccagcgcgacaaccaccgtctcatcgagaccctgctccgcctccgc
gatctcggcaatacgctgatcgtggtcgagcacgatgaggacaccatccgcgcggcggat
tgggtggtcgacatcggtcccggcgccggtgagcacggtggacagatcgtcgtctccggg
ccggtgcctgaactgctggcgtgcaaagagtcgctcaccggcgcgtacctttccggacgg
cgaaccatcgaggtaccggcgatccggcggcccgccgatcccaagcgccggctgatcgtc
aagggtgcccgagagcacaacctccgcaacatcgacgtcgcgtttccgctgggctgcttc
gtcgtcgtgaccggcgtctcgggctcgggaaaatcaacgctggtcaacgacattctctat
gccgcgttggccaaggaactgaacggggcgaaaaccgtgcccggccggcacgaccgcatc
ctcggtctcgacctcgtcgacaaggcgattcacgtcgaccagagcccgatcggccggacg
ccgcggtcgaaccccgcgacctacaccggtgtgtttgatgacatccgccggctcttcgcg
gagaccacggaagccaaggtgcgcggatacactcccgggcgtttctccttcaacgtgaag
ggcggccgctgcgaagcgtgcgccggcgacggcaccatcaaaatcgaaatgaatttcctg
cccgacgtttacgtgccgtgcgaagtgtgccatggcgcgcggtacaaccgggagaccctc
gaggtgcattacaagggcaagacaattgccgacgtcctggacatgccgatcgaagaagca
gccgacttcttcggcccgctgccgggcatcgcccgccggctcaccactctcgtcgaggtc
ggtctgggttatgtccgactcggccaaccggccccgaccctctccggcggggaagcgcag
cgggtgaaactcgcgtccgagctgcagaagcgggcgaccggtcgcaccgtgtacatcctc
gacgagccgacgaccggcctgcatttcgaagacgtccgcaagctgcttgccgttctgcaa
tcccttgtcgagcgcggcaataccgtgatcgtcattgagcataatcttgacgtcatcaag
acggccgactgggtgatcgacctcggtcccgagggcggcgccgccggcggacaggtggtc
gccgagggtccacccgaacaggtggcggcgacggaaggcagctacaccggcgcctttctg
cgcaaggtgctccgcctctcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (26)   
   Pfam (26)   
All databases (44)   

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