KEGG   Atta cephalotes (leaf cutting ant): 105623483
Entry
105623483         CDS       T04923                                 
Name
(RefSeq) protein PAT1 homolog 1
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
acep  Atta cephalotes (leaf cutting ant)
Pathway
acep03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:acep00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105623483
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acep03019]
    105623483
Messenger RNA biogenesis [BR:acep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105623483
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     105623483
SSDB
Motif
Pfam: Ctf8 PLATZ
Other DBs
NCBI-GeneID: 105623483
NCBI-ProteinID: XP_012060268
UniProt: A0A158NRW0
Position
Unknown
AA seq 742 aa
MADTFFGFDTTLGENNLEDGLECPLEEDELEEEEYDALNDETFGPDAAIGDWEEDHEKLA
EITESNRLHNQSATNKKSISNINIEDNLSHLVLDKEGIVPRPGVWGSPLNLSLPKAQPRL
SLPNACTVEELERGLIANRPPPGLSKPQTQQQKKSEGSLLFEALSLNEKLQVNGLPPPRF
PPGLGLPGAHPIVVPNIRAPHPQLMQHPRILGLINQAGTVLRYPSPPHLMSHLMPQPVPR
QPLHGSYGFPPQLHPNLGGPQFLRPDHMMPAFPNNQTNHQQHQHSYSHLGNQRNQNRSYY
HNEQQAGHQAFFKNNQYPHRNHDRNNQRPYHHQNYSHNINGNASGEYEHSGKLAIKAHEK
QWLINIQLLQLNTIQPYVDDHYYVVFCDKRNKQHANREQKDKKHHNNNGYHRDHRDWEPT
PQTASRSAYTPAQFENSLGKLHCSSVTAPRKLIDMDVVSNNDSQSTPQSQQKDTKKTRQL
LLEIERLFTLQFKLEDLSNPLALIPEPQQQQEGESDVNTTKTEPELINMILTCMQQLIQD
DKLASMLSIRKGKTLLLRFLPHLNVTEYSKQLRELWTAIFKGLAVIGRRDCHILTDFYSE
FRRWLDAVKDFDTILRLARALSDSATNHPVKNNSLTFALLNKFGVSAIAAMLEQVEQLCD
TDDSLPSEWSTFVVTIVELIGDSPPCVAPCQPITTNTLKKHLNRISSLKLERYTALAFFI
WFLRFCIQLQNTFKCIRQMRYT
NT seq 2229 nt   +upstreamnt  +downstreamnt
atggcagacacttttttcggttttgatactacgctcggagagaacaatctagaagatgga
ctggaatgtccattagaagaagatgaacttgaagaggaagagtacgatgcgctaaatgat
gagacatttggtcccgatgctgctattggtgattgggaagaagatcatgagaaacttgcc
gaaattaccgaatcaaatcgccttcataatcagagtgcaacaaataaaaagtctatttct
aacataaatattgaagataatttatcacatttggtattggataaggaaggaatagttccc
cgacctggtgtttggggtagtcctttgaatttatctcttccgaaagctcagccacgatta
tctttaccaaatgcttgtacggtggaagagttggaaagagggcttattgcaaatagacca
ccaccaggtctcagcaaacctcaaacgcaacaacagaagaaatctgaaggttcgcttctt
tttgaggctctctctttgaatgagaaacttcaagttaatggcctacctccaccacgtttt
ccaccaggattgggtctacctggagcacaccctatagttgtgcccaatataagagcacca
catcctcagttgatgcaacatcctagaatattaggcttaattaatcaagctggtactgtg
ttacgttatccttctccaccacatttaatgtcacatttaatgccacaaccagttccaagg
caacctcttcacggctcttatggttttcctcctcaactacatcctaatttaggaggccca
cagttccttcgaccagatcacatgatgcctgcatttcctaacaaccaaaccaatcatcag
caacaccaacattcttactcacatttaggaaatcagagaaaccagaacagatcttactat
cataacgaacaacaagctggacatcaagcattttttaaaaataatcaatatcctcatcgt
aatcatgacagaaataatcaaagaccttatcatcatcaaaattattctcacaacattaat
ggtaatgcttcgggagaatatgaacactcaggaaaacttgctataaaagctcatgagaag
caatggttaattaatattcaattattacaacttaatacaattcaaccgtatgttgatgat
cactattatgtcgtattctgtgataagcggaataaacaacatgcaaatcgagaacaaaaa
gataagaagcatcataataacaatggatatcacagggatcatagagattgggaaccaaca
cctcaaaccgcttcaagatcagcatatacgccagctcaatttgagaattcattaggcaaa
cttcattgcagtagtgtgacagcaccacgtaaacttatcgacatggatgtcgtatcaaat
aacgactctcaatctactcctcagtctcaacagaaggacactaaaaaaacacgacaacta
cttcttgaaattgagagactgtttacacttcaattcaagctcgaagatttgagtaatcca
ctcgctttaattccggaacctcaacaacaacaggaaggggaatctgacgtaaatacgact
aaaactgaaccagaattgataaacatgattttaacatgtatgcaacagttaatacaagat
gacaaattagctagtatgctaagtattcgaaaaggaaagacgttactactgcgtttttta
cctcacctaaatgtgacagaatatagtaagcagttgagagaattgtggactgcgatattt
aaaggtttagccgtgataggccgtagagattgtcatatattaacagatttttattccgaa
tttcgaagatggctcgatgctgtgaaagattttgatactatattgcgattagcaagagca
ttatccgactctgctactaatcatcctgttaaaaataatagcttaacttttgctcttctg
aataagtttggtgtgtctgcaatagcagcgatgctcgagcaagttgaacaattgtgtgac
acagatgattccctgccttctgaatggtcaacttttgtagtgacgatagttgagttgatt
ggtgattcgccaccctgtgttgcaccttgtcaaccaattactacaaatacgctcaagaaa
catctgaaccggatttccagtttaaaactagaaaggtatacagcgctagccttctttata
tggtttctgcgattctgcatccagcttcaaaatacatttaaatgcatcaggcaaatgcgt
tatacataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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