KEGG   Acetobacter sp. JWB: DS739_01635
Entry
DS739_01635       CDS       T05544                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
acet  Acetobacter sp. JWB
Pathway
acet03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:acet00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DS739_01635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acet03021]
    DS739_01635
   03019 Messenger RNA biogenesis [BR:acet03019]
    DS739_01635
Transcription machinery [BR:acet03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     DS739_01635
Messenger RNA biogenesis [BR:acet03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     DS739_01635
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 NACHT OB_RNB AAA_22 ATPase_2 AAA Spore_III_AA
Other DBs
NCBI-ProteinID: AXC25619
Position
complement(335512..336810)
AA seq 432 aa
MHLAELKAKSPADLLACAEDLNIENASSLRKQDMMFAILKALADNDQAIYGEGTLEIMHD
GFGYLRSPESNYLPGPDDIYISPTQVRRFALRTGDTVEGQIRAPRDGERYFSMLKINTIN
FEPPDAVRHRINFDNLTPLYPERRLQMEVESQATAPEPKSEKGKKSAQKDFTPRVIDLVS
PIGMGQRALIVAPPRSGKTVMLQSIASSISANHPEVFLIVLLIDERPEEVTDMARSVRGE
VIASTFDEPAHRHVQVTEMVLEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLT
GGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSELVLD
RKLADKRTFPAIDITKSGTRKEELLVDRATLSKMWVLRRILAPMGTMDAMDFLLDKLKYS
KTNNDFFEAMNN
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgcatcttgcggaactcaaggccaaatccccagcggatcttctggcctgcgctgaagac
ctgaatattgaaaacgcgtcatccctgcgcaagcaggacatgatgtttgccatcctgaag
gcgctggccgataacgaccaagcgatctacggcgaaggcacgcttgaaatcatgcacgac
gggtttggttacctgcgttcccccgaatcaaactaccttcccggcccggatgatatttat
atctcccccacacaggtgcgccgctttgccctgcgcacaggtgatacggtagagggccag
attcgcgccccgcgtgatggtgaacgctacttctccatgctcaagatcaacacgatcaac
tttgagccaccggatgctgtgcgccaccgaatcaactttgataacctgaccccactttac
cctgagcgtcgccttcagatggaagtggaaagccaggcaacagccccggaacccaaatcc
gaaaaaggcaaaaaaagcgcgcaaaaagactttaccccgcgcgttattgatcttgtttcc
cccattggtatgggccagcgcgcccttattgtggccccacctcgctcgggcaaaacggtt
atgctgcaaagcattgcctcttccatcagtgccaaccatccggaagttttcctgatcgtt
ctgctgattgatgaacgcccagaagaagttacggacatggcgcgctctgtgcgcggtgaa
gtgattgcctccacctttgatgagcccgcacaccgccacgtgcaggtaacggaaatggtg
ctggaaaaagccaaacgccttgttgaacacaagcgcgatgtggtgatcctgctggattcc
attacccgtctggcacgcgcctacaacaccgttgtgccctcatccggcaaggtgctgacc
gggggtgtggatgccaacgccctacaacggcctaagcgcttttttggtgccgcccgtaat
attgaagaaggtggttcccttaccattatcgccacggcgctgattgataccggcagccgc
atggacgaagtgatctttgaagaattcaaaggcacgggcaactcggaactggtgctggat
cgtaagctggcagacaagcgtaccttcccggcaatcgacatcaccaaaagcggcacccgt
aaggaagaactgctggtggatcgggctacactgtccaaaatgtgggttctgcgccgcatt
ctggcccctatgggcacgatggacgccatggacttcctgctggacaagctgaaatacagc
aaaaccaacaatgacttctttgaagccatgaacaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system