KEGG   Aerococcus christensenii: AWM71_04280
Entry
AWM71_04280       CDS       T04262                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
acg  Aerococcus christensenii
Pathway
acg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:acg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AWM71_04280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acg03021]
    AWM71_04280
   03019 Messenger RNA biogenesis [BR:acg03019]
    AWM71_04280
Transcription machinery [BR:acg03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     AWM71_04280
Messenger RNA biogenesis [BR:acg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     AWM71_04280
SSDB
Motif
Pfam: ATP-synt_ab Rho_RNA_bind Rho_N ATPase_2 AAA_25 NACHT AAA_22 DUF3086 AAA
Other DBs
NCBI-ProteinID: AMB92555
UniProt: A0A0X8F839
Position
910005..911300
AA seq 431 aa
MAKKEGKTYEKDEVVTLASLSEQTLKQIYTYARQYKIPNYSKMTKKELSLAVVRAQGESK
GYFPVEGVLDITGPEFGFLYPINYSASQEDIYISSTQINRFGLRNGDLIKGLARPPKERE
RRNGLLQIATVNGKDPELAKERDHFPALTPIYPDRLMKLETDADKLSLRMIDLLSPIGFG
QRGLIAAPPKAGKTVLLKQVANAIATNYPEVVLIVLLIDERPEEVTDFERNVQAEVVAST
FDQHPRNHIQVAELVIERAKRLVEDKQDVVVLIDSLTRLVRAYNNVEPPSGRTMSGGLDP
VALNGPKKIFGSARNIEGGGSLTILATALIQTDSKADEVIYEEFKGTGNMELHLDRSLAQ
SRIFPAIDVNKSGTRKEDLLLDTQTLEAAYNLRQLMTGNLKEDTRQLLMTFESIVSNQEL
IEKILVKKGKK
NT seq 1296 nt   +upstreamnt  +downstreamnt
atggcaaaaaaagaaggtaaaacttatgaaaaggatgaagttgtcaccttagccagctta
tcagaacaaacgctaaaacaaatttatacctacgcccgtcagtacaaaattcccaattat
tctaaaatgactaaaaaggaactttctttagcggttgttcgtgcgcaaggggaaagcaag
ggttattttccagtggaaggggtattagatatcacaggtccagaatttgggttcttgtac
cctattaattattctgcgagtcaagaagatatttatatttcttcgacacagattaaccga
tttggacttcggaatggagatttgataaaaggcttagctcgtccaccaaaagagcgggag
agaagaaatggcttattacagattgctacggtcaatggcaaagatcctgaattagccaaa
gaaagggaccattttccagctttaacgcctatttatcctgatcgcttaatgaaattagaa
acggatgcggataagctttctcttcgtatgattgatttgttatctcctatcggttttggt
caaagaggcttaattgccgctccacctaaagcagggaaaactgtattattgaagcaagta
gccaatgcgattgcaactaactatccggaagtagtgctcattgttctcctcattgatgag
cgcccagaagaagttactgattttgaacggaatgtgcaggcagaagttgtggcttcgact
tttgatcaacatcctaggaatcacattcaggttgcagagttagtgatcgaacgggctaaa
agattggttgaagataagcaagatgttgtagttttgatagattccttgacgcgattggtt
cgtgcttacaataatgtagagcctccatctggacgtactatgtctggcgggctggatcct
gtggctttaaatggacctaaaaagatttttggctctgcacggaatattgaaggaggaggg
agtctaacgattttagcgactgcgctgattcaaaccgattcaaaagcagatgaagttatt
tatgaagaatttaaaggaacgggtaatatggaacttcatttagaccgatctcttgctcaa
agtcgtatttttccagctattgatgttaataagtccggaacgcgaaaagaagatcttttg
ttagatactcaaactttggaagctgcatataatttgcgccaattaatgacaggaaatttg
aaagaagacacacgacaacttttgatgacttttgagagtatagtctctaatcaagaattg
atagaaaagattttagtcaagaagggaaaaaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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